Protein–RNA interactions for Protein: P32908

SMC1, Structural maintenance of chromosomes protein 1, yeastyeast

Predictions only

Length 1,225 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMC1P32908 tA(AGC)M1tA(AGC)M1 73 nt8.9□□□□□ -0.98
SMC1P32908 tA(AGC)M2tA(AGC)M2 73 nt8.9□□□□□ -0.98
SMC1P32908 tA(AGC)PtA(AGC)P 73 nt8.9□□□□□ -0.98
SMC1P32908 YDR509WYDR509W 348 nt8.9□□□□□ -0.98
SMC1P32908 YEL074WYEL074W 339 nt8.89□□□□□ -0.99
SMC1P32908 AIM41YOR215C 558 nt8.88□□□□□ -0.99
SMC1P32908 ILV2YMR108W 2064 nt8.88□□□□□ -0.99
SMC1P32908 SIR2YDL042C 1689 nt8.88□□□□□ -0.99
SMC1P32908 FET5YFL041W 1869 nt8.87□□□□□ -0.99
SMC1P32908 IPL1YPL209C 1104 nt8.87□□□□□ -0.99
SMC1P32908 FLX1YIL134W 936 nt8.86□□□□□ -0.99
SMC1P32908 YJL064WYJL064W 396 nt8.86□□□□□ -0.99
SMC1P32908 OCA1YNL099C 717 nt8.86□□□□□ -0.99
SMC1P32908 YMC2YBR104W 990 nt8.86□□□□□ -0.99
SMC1P32908 YHP1YDR451C 1062 nt8.85□□□□□ -0.99
SMC1P32908 GET2YER083C 858 nt8.85□□□□□ -0.99
SMC1P32908 MOB1YIL106W 945 nt8.85□□□□□ -0.99
SMC1P32908 NAP1YKR048C 1254 nt8.85□□□□□ -0.99
SMC1P32908 AAC3YBR085W 924 nt8.85□□□□□ -0.99
SMC1P32908 MTO1YGL236C 2010 nt8.84□□□□□ -0.99
SMC1P32908 YOR072WYOR072W 315 nt8.84□□□□□ -0.99
SMC1P32908 ENO1YGR254W 1314 nt8.83□□□□□ -1
SMC1P32908 LYS20YDL182W 1287 nt8.83□□□□□ -1
SMC1P32908 YFR020WYFR020W 699 nt8.83□□□□□ -1
SMC1P32908 MRS3YJL133W 945 nt8.83□□□□□ -1
SMC1P32908 AAT1YKL106W 1356 nt8.83□□□□□ -1
SMC1P32908 BNA3YJL060W 1335 nt8.81□□□□□ -1
SMC1P32908 NPL6YMR091C 1308 nt8.81□□□□□ -1
SMC1P32908 YCR049CYCR049C 447 nt8.81□□□□□ -1
SMC1P32908 MRS4YKR052C 915 nt8.81□□□□□ -1
SMC1P32908 PAU19YMR325W 375 nt8.81□□□□□ -1
SMC1P32908 TRP2YER090W 1524 nt8.8□□□□□ -1
SMC1P32908 TMS1YDR105C 1422 nt8.8□□□□□ -1
SMC1P32908 MLS1YNL117W 1665 nt8.79□□□□□ -1
SMC1P32908 LSM12YHR121W 564 nt8.79□□□□□ -1
SMC1P32908 THI6YPL214C 1623 nt8.79□□□□□ -1
SMC1P32908 YCR099CYCR099C 468 nt8.78□□□□□ -1
SMC1P32908 RSM7YJR113C 744 nt8.78□□□□□ -1
SMC1P32908 PUP1YOR157C 786 nt8.78□□□□□ -1
SMC1P32908 PCL10YGL134W 1302 nt8.78□□□□□ -1
SMC1P32908 TPN1YGL186C 1740 nt8.77□□□□□ -1
SMC1P32908 CYC3YAL039C 810 nt8.77□□□□□ -1.01
SMC1P32908 HXT11YOL156W 1704 nt8.77□□□□□ -1.01
SMC1P32908 YLR072WYLR072W 2082 nt8.76□□□□□ -1.01
SMC1P32908 EMC3YKL207W 762 nt8.76□□□□□ -1.01
SMC1P32908 YPL277CYPL277C 1464 nt8.76□□□□□ -1.01
SMC1P32908 SRP102YKL154W 735 nt8.75□□□□□ -1.01
SMC1P32908 YPR150WYPR150W 522 nt8.75□□□□□ -1.01
SMC1P32908 HEM14YER014W 1620 nt8.75□□□□□ -1.01
SMC1P32908 DTR1YBR180W 1719 nt8.74□□□□□ -1.01
SMC1P32908 YCR025CYCR025C 411 nt8.74□□□□□ -1.01
SMC1P32908 YLR280CYLR280C 351 nt8.74□□□□□ -1.01
SMC1P32908 snR86snR86 1004 nt8.73□□□□□ -1.01
SMC1P32908 GAL2YLR081W 1725 nt8.72□□□□□ -1.01
SMC1P32908 MMS21YEL019C 804 nt8.72□□□□□ -1.01
SMC1P32908 YIR035CYIR035C 765 nt8.72□□□□□ -1.01
SMC1P32908 CWC25YNL245C 540 nt8.72□□□□□ -1.01
SMC1P32908 GTB1YDR221W 2109 nt8.71□□□□□ -1.01
SMC1P32908 tD(GUC)BtD(GUC)B 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)DtD(GUC)D 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)G1tD(GUC)G1 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)G2tD(GUC)G2 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)I1tD(GUC)I1 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)I2tD(GUC)I2 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)J1tD(GUC)J1 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)J2tD(GUC)J2 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)J3tD(GUC)J3 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)J4tD(GUC)J4 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)KtD(GUC)K 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)L1tD(GUC)L1 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)L2tD(GUC)L2 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)MtD(GUC)M 72 nt8.71□□□□□ -1.02
SMC1P32908 tD(GUC)OtD(GUC)O 72 nt8.71□□□□□ -1.02
SMC1P32908 COA2YPL189C-A 207 nt8.71□□□□□ -1.02
SMC1P32908 MRPL36YBR122C 534 nt8.71□□□□□ -1.02
SMC1P32908 ALG7YBR243C 1347 nt8.71□□□□□ -1.02
SMC1P32908 ERO1YML130C 1692 nt8.71□□□□□ -1.02
SMC1P32908 YBR056WYBR056W 1506 nt8.7□□□□□ -1.02
SMC1P32908 TAF4YMR005W 1167 nt8.7□□□□□ -1.02
SMC1P32908 SER2YGR208W 930 nt8.69□□□□□ -1.02
SMC1P32908 YLR460CYLR460C 1131 nt8.69□□□□□ -1.02
SMC1P32908 YMR306C-AYMR306C-A 390 nt8.69□□□□□ -1.02
SMC1P32908 SRM1YGL097W 1449 nt8.69□□□□□ -1.02
SMC1P32908 RRP1YDR087C 837 nt8.68□□□□□ -1.02
SMC1P32908 MPC1YGL080W 393 nt8.68□□□□□ -1.02
SMC1P32908 YHR145CYHR145C 357 nt8.68□□□□□ -1.02
SMC1P32908 YJR149WYJR149W 1215 nt8.68□□□□□ -1.02
SMC1P32908 YNL234WYNL234W 1281 nt8.68□□□□□ -1.02
SMC1P32908 MEX67YPL169C 1800 nt8.68□□□□□ -1.02
SMC1P32908 YJL009WYJL009W 327 nt8.67□□□□□ -1.02
SMC1P32908 RNA170RNA170 169 nt8.67□□□□□ -1.02
SMC1P32908 BUB2YMR055C 921 nt8.67□□□□□ -1.02
SMC1P32908 RFC1YOR217W 2586 nt8.67□□□□□ -1.02
SMC1P32908 GAT1YFL021W 1533 nt8.66□□□□□ -1.02
SMC1P32908 MIM1YOL026C 342 nt8.66□□□□□ -1.02
SMC1P32908 MET22YOL064C 1074 nt8.66□□□□□ -1.02
SMC1P32908 CBK1YNL161W 2271 nt8.66□□□□□ -1.02
SMC1P32908 EHD3YDR036C 1503 nt8.65□□□□□ -1.02
SMC1P32908 YMR210WYMR210W 1350 nt8.65□□□□□ -1.02
SMC1P32908 YGR210CYGR210C 1236 nt8.65□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 37.8 ms