Protein–RNA interactions for Protein: P31649

Slc6a13, Sodium- and chloride-dependent GABA transporter 2, mousemouse

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a13P31649 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Slc6a13P31649 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Slc6a13P31649 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
Slc6a13P31649 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
Slc6a13P31649 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Slc6a13P31649 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC24.1■■□□□ 1.45
Slc6a13P31649 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Slc6a13P31649 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Slc6a13P31649 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Slc6a13P31649 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc6a13P31649 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc6a13P31649 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc6a13P31649 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Slc6a13P31649 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Slc6a13P31649 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC24.08■■□□□ 1.44
Slc6a13P31649 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Slc6a13P31649 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
Slc6a13P31649 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Slc6a13P31649 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC24.06■■□□□ 1.44
Slc6a13P31649 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Slc6a13P31649 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Slc6a13P31649 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Slc6a13P31649 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Slc6a13P31649 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC24.05■■□□□ 1.44
Slc6a13P31649 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Slc6a13P31649 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Slc6a13P31649 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Slc6a13P31649 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC24.03■■□□□ 1.44
Slc6a13P31649 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Slc6a13P31649 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Slc6a13P31649 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
Slc6a13P31649 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC24.01■■□□□ 1.43
Slc6a13P31649 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Slc6a13P31649 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Slc6a13P31649 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
Slc6a13P31649 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
Slc6a13P31649 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.99■■□□□ 1.43
Slc6a13P31649 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Slc6a13P31649 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Slc6a13P31649 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Slc6a13P31649 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.98■■□□□ 1.43
Slc6a13P31649 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Slc6a13P31649 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Slc6a13P31649 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.97■■□□□ 1.43
Slc6a13P31649 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Slc6a13P31649 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.96■■□□□ 1.43
Slc6a13P31649 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
Slc6a13P31649 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.96■■□□□ 1.43
Slc6a13P31649 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Slc6a13P31649 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Slc6a13P31649 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Slc6a13P31649 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Slc6a13P31649 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.92■■□□□ 1.42
Slc6a13P31649 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Slc6a13P31649 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Slc6a13P31649 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Slc6a13P31649 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Slc6a13P31649 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.91■■□□□ 1.42
Slc6a13P31649 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.91■■□□□ 1.42
Slc6a13P31649 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.91■■□□□ 1.42
Slc6a13P31649 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.91■■□□□ 1.42
Slc6a13P31649 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Slc6a13P31649 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Slc6a13P31649 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.42
Slc6a13P31649 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Slc6a13P31649 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Slc6a13P31649 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Slc6a13P31649 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.87■■□□□ 1.41
Slc6a13P31649 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Slc6a13P31649 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Slc6a13P31649 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Slc6a13P31649 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Slc6a13P31649 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Slc6a13P31649 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Slc6a13P31649 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Slc6a13P31649 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
Slc6a13P31649 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Slc6a13P31649 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Slc6a13P31649 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Slc6a13P31649 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Slc6a13P31649 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.85■■□□□ 1.41
Slc6a13P31649 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.85■■□□□ 1.41
Slc6a13P31649 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Slc6a13P31649 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Slc6a13P31649 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Slc6a13P31649 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Slc6a13P31649 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Slc6a13P31649 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Slc6a13P31649 Particl-201ENSMUST00000205370 1560 ntBASIC23.81■■□□□ 1.4
Slc6a13P31649 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Slc6a13P31649 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Slc6a13P31649 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Slc6a13P31649 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Slc6a13P31649 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Slc6a13P31649 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.76■■□□□ 1.39
Slc6a13P31649 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.76■■□□□ 1.39
Slc6a13P31649 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Slc6a13P31649 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.75■■□□□ 1.39
Slc6a13P31649 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.75■■□□□ 1.39
Slc6a13P31649 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms