Protein–RNA interactions for Protein: P27790

Cenpb, Major centromere autoantigen B, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CenpbP27790 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CenpbP27790 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC31.37■■■□□ 2.61
CenpbP27790 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
CenpbP27790 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC31.36■■■□□ 2.61
CenpbP27790 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC31.36■■■□□ 2.61
CenpbP27790 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
CenpbP27790 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.33■■■□□ 2.61
CenpbP27790 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC31.33■■■□□ 2.61
CenpbP27790 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
CenpbP27790 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC31.33■■■□□ 2.61
CenpbP27790 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CenpbP27790 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
CenpbP27790 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
CenpbP27790 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
CenpbP27790 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CenpbP27790 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
CenpbP27790 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
CenpbP27790 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC31.3■■■□□ 2.6
CenpbP27790 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC31.3■■■□□ 2.6
CenpbP27790 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC31.3■■■□□ 2.6
CenpbP27790 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC31.29■■■□□ 2.6
CenpbP27790 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CenpbP27790 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC31.27■■■□□ 2.6
CenpbP27790 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC31.26■■■□□ 2.6
CenpbP27790 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC31.26■■■□□ 2.6
CenpbP27790 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.26■■■□□ 2.59
CenpbP27790 Notumos-201ENSMUST00000151998 2659 ntBASIC31.26■■■□□ 2.59
CenpbP27790 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CenpbP27790 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CenpbP27790 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CenpbP27790 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CenpbP27790 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.23■■■□□ 2.59
CenpbP27790 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC31.23■■■□□ 2.59
CenpbP27790 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CenpbP27790 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC31.23■■■□□ 2.59
CenpbP27790 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
CenpbP27790 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC31.22■■■□□ 2.59
CenpbP27790 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC31.22■■■□□ 2.59
CenpbP27790 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CenpbP27790 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC31.22■■■□□ 2.59
CenpbP27790 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC31.21■■■□□ 2.59
CenpbP27790 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CenpbP27790 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CenpbP27790 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CenpbP27790 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
CenpbP27790 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC31.19■■■□□ 2.58
CenpbP27790 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CenpbP27790 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CenpbP27790 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CenpbP27790 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
CenpbP27790 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CenpbP27790 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
CenpbP27790 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CenpbP27790 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC31.17■■■□□ 2.58
CenpbP27790 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CenpbP27790 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC31.16■■■□□ 2.58
CenpbP27790 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CenpbP27790 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC31.15■■■□□ 2.58
CenpbP27790 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC31.15■■■□□ 2.58
CenpbP27790 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CenpbP27790 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
CenpbP27790 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CenpbP27790 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
CenpbP27790 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CenpbP27790 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
CenpbP27790 AC166822.3-201ENSMUST00000227394 661 ntBASIC31.11■■■□□ 2.57
CenpbP27790 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
CenpbP27790 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC31.11■■■□□ 2.57
CenpbP27790 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC31.11■■■□□ 2.57
CenpbP27790 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CenpbP27790 Mipep-204ENSMUST00000225043 1548 ntBASIC31.08■■■□□ 2.57
CenpbP27790 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
CenpbP27790 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
CenpbP27790 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CenpbP27790 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
CenpbP27790 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
CenpbP27790 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CenpbP27790 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CenpbP27790 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CenpbP27790 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CenpbP27790 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CenpbP27790 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
CenpbP27790 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC31.04■■■□□ 2.56
CenpbP27790 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CenpbP27790 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CenpbP27790 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC31.02■■■□□ 2.56
CenpbP27790 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.56
CenpbP27790 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
CenpbP27790 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
CenpbP27790 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC31.01■■■□□ 2.55
CenpbP27790 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC31.01■■■□□ 2.55
CenpbP27790 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC31■■■□□ 2.55
CenpbP27790 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC31■■■□□ 2.55
CenpbP27790 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CenpbP27790 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC31■■■□□ 2.55
CenpbP27790 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CenpbP27790 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CenpbP27790 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
CenpbP27790 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CenpbP27790 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms