Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 CAK1YFL029C 1107 nt7.68□□□□□ -1.18
RPL40AP0CH08 AIM1YAL046C 357 nt7.67□□□□□ -1.18
RPL40AP0CH08 YLR046CYLR046C 813 nt7.67□□□□□ -1.18
RPL40AP0CH08 AAD14YNL331C 1131 nt7.66□□□□□ -1.18
RPL40AP0CH08 ENT4YLL038C 744 nt7.65□□□□□ -1.18
RPL40AP0CH08 BXI1YNL305C 894 nt7.65□□□□□ -1.18
RPL40AP0CH08 PIH1YHR034C 1035 nt7.64□□□□□ -1.19
RPL40AP0CH08 YNR064CYNR064C 873 nt7.64□□□□□ -1.19
RPL40AP0CH08 MEX67YPL169C 1800 nt7.64□□□□□ -1.19
RPL40AP0CH08 MCP1YOR228C 909 nt7.63□□□□□ -1.19
RPL40AP0CH08 ATP2YJR121W 1536 nt7.62□□□□□ -1.19
RPL40AP0CH08 Q0182Q0182 405 nt7.61□□□□□ -1.19
RPL40AP0CH08 YPT11YNL304W 1254 nt7.61□□□□□ -1.19
RPL40AP0CH08 SRP54YPR088C 1626 nt7.6□□□□□ -1.19
RPL40AP0CH08 RSM7YJR113C 744 nt7.59□□□□□ -1.19
RPL40AP0CH08 SAC7YDR389W 1965 nt7.59□□□□□ -1.2
RPL40AP0CH08 YBL111CYBL111C 2004 nt7.58□□□□□ -1.2
RPL40AP0CH08 INH1YDL181W 258 nt7.58□□□□□ -1.2
RPL40AP0CH08 YIL168WYIL168W 384 nt7.58□□□□□ -1.2
RPL40AP0CH08 RPC31YNL151C 756 nt7.58□□□□□ -1.2
RPL40AP0CH08 OCH1YGL038C 1443 nt7.58□□□□□ -1.2
RPL40AP0CH08 SWT21YNL187W 1074 nt7.57□□□□□ -1.2
RPL40AP0CH08 ITR2YOL103W 1830 nt7.57□□□□□ -1.2
RPL40AP0CH08 KRR1YCL059C 951 nt7.56□□□□□ -1.2
RPL40AP0CH08 HAC1YFL031W 717 nt7.56□□□□□ -1.2
RPL40AP0CH08 PLB3YOL011W 2061 nt7.55□□□□□ -1.2
RPL40AP0CH08 YLR460CYLR460C 1131 nt7.55□□□□□ -1.2
RPL40AP0CH08 MIM1YOL026C 342 nt7.55□□□□□ -1.2
RPL40AP0CH08 YPL136WYPL136W 369 nt7.55□□□□□ -1.2
RPL40AP0CH08 SPE3YPR069C 882 nt7.55□□□□□ -1.2
RPL40AP0CH08 MDL2YPL270W 2322 nt7.55□□□□□ -1.2
RPL40AP0CH08 tD(GUC)BtD(GUC)B 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)DtD(GUC)D 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)G1tD(GUC)G1 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)G2tD(GUC)G2 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)I1tD(GUC)I1 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)I2tD(GUC)I2 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)J1tD(GUC)J1 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)J2tD(GUC)J2 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)J3tD(GUC)J3 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)J4tD(GUC)J4 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)KtD(GUC)K 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)L1tD(GUC)L1 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)L2tD(GUC)L2 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)MtD(GUC)M 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 tD(GUC)OtD(GUC)O 72 nt7.54□□□□□ -1.2
RPL40AP0CH08 ATP23YNR020C 813 nt7.54□□□□□ -1.2
RPL40AP0CH08 GID7YCL039W 2238 nt7.54□□□□□ -1.2
RPL40AP0CH08 DPL1YDR294C 1770 nt7.52□□□□□ -1.21
RPL40AP0CH08 AIM46YHR199C 933 nt7.52□□□□□ -1.21
RPL40AP0CH08 SNX3YOR357C 489 nt7.52□□□□□ -1.21
RPL40AP0CH08 KEL3YPL263C 1956 nt7.51□□□□□ -1.21
RPL40AP0CH08 SUN4YNL066W 1263 nt7.51□□□□□ -1.21
RPL40AP0CH08 LEU4YNL104C 1860 nt7.51□□□□□ -1.21
RPL40AP0CH08 CHS7YHR142W 951 nt7.5□□□□□ -1.21
RPL40AP0CH08 HBS1YKR084C 1836 nt7.5□□□□□ -1.21
RPL40AP0CH08 FET5YFL041W 1869 nt7.49□□□□□ -1.21
RPL40AP0CH08 LGE1YPL055C 999 nt7.49□□□□□ -1.21
RPL40AP0CH08 YKL053WYKL053W 375 nt7.48□□□□□ -1.21
RPL40AP0CH08 YPT31YER031C 672 nt7.47□□□□□ -1.21
RPL40AP0CH08 CPT1YNL130C 1182 nt7.47□□□□□ -1.21
RPL40AP0CH08 SFL1YOR140W 2301 nt7.46□□□□□ -1.21
RPL40AP0CH08 MET1YKR069W 1782 nt7.46□□□□□ -1.21
RPL40AP0CH08 OPI7YDR360W 435 nt7.46□□□□□ -1.22
RPL40AP0CH08 MET22YOL064C 1074 nt7.46□□□□□ -1.22
RPL40AP0CH08 NPP2YEL016C 1482 nt7.45□□□□□ -1.22
RPL40AP0CH08 ELO1YJL196C 933 nt7.45□□□□□ -1.22
RPL40AP0CH08 PTH2YBL057C 627 nt7.45□□□□□ -1.22
RPL40AP0CH08 snR31snR31 225 nt7.45□□□□□ -1.22
RPL40AP0CH08 MTO1YGL236C 2010 nt7.45□□□□□ -1.22
RPL40AP0CH08 IMD1YAR073W 1212 nt7.44□□□□□ -1.22
RPL40AP0CH08 ZIM17YNL310C 525 nt7.44□□□□□ -1.22
RPL40AP0CH08 UME1YPL139C 1383 nt7.44□□□□□ -1.22
RPL40AP0CH08 YDR467CYDR467C 327 nt7.43□□□□□ -1.22
RPL40AP0CH08 YDR387CYDR387C 1668 nt7.43□□□□□ -1.22
RPL40AP0CH08 PDC6YGR087C 1692 nt7.42□□□□□ -1.22
RPL40AP0CH08 tE(CUC)DtE(CUC)D 72 nt7.42□□□□□ -1.22
RPL40AP0CH08 tE(CUC)ItE(CUC)I 72 nt7.42□□□□□ -1.22
RPL40AP0CH08 NCA3YJL116C 1014 nt7.42□□□□□ -1.22
RPL40AP0CH08 OLA1YBR025C 1185 nt7.42□□□□□ -1.22
RPL40AP0CH08 IRC7YFR055W 1023 nt7.41□□□□□ -1.22
RPL40AP0CH08 CYS3YAL012W 1185 nt7.41□□□□□ -1.22
RPL40AP0CH08 ORT1YOR130C 879 nt7.41□□□□□ -1.22
RPL40AP0CH08 PTC6YCR079W 1329 nt7.41□□□□□ -1.22
RPL40AP0CH08 MPH3YJR160C 1809 nt7.41□□□□□ -1.22
RPL40AP0CH08 DUR3YHL016C 2208 nt7.4□□□□□ -1.22
RPL40AP0CH08 UFD1YGR048W 1086 nt7.4□□□□□ -1.22
RPL40AP0CH08 AIM20YIL158W 615 nt7.4□□□□□ -1.22
RPL40AP0CH08 FIT1YDR534C 1587 nt7.4□□□□□ -1.22
RPL40AP0CH08 PNS1YOR161C 1620 nt7.4□□□□□ -1.22
RPL40AP0CH08 SAN1YDR143C 1833 nt7.4□□□□□ -1.23
RPL40AP0CH08 YMR265CYMR265C 1386 nt7.39□□□□□ -1.23
RPL40AP0CH08 SPR1YOR190W 1338 nt7.39□□□□□ -1.23
RPL40AP0CH08 YKL147CYKL147C 618 nt7.39□□□□□ -1.23
RPL40AP0CH08 TRP2YER090W 1524 nt7.38□□□□□ -1.23
RPL40AP0CH08 YPQ1YOL092W 927 nt7.38□□□□□ -1.23
RPL40AP0CH08 CST26YBR042C 1194 nt7.38□□□□□ -1.23
RPL40AP0CH08 GPD2YOL059W 1323 nt7.37□□□□□ -1.23
RPL40AP0CH08 HXT11YOL156W 1704 nt7.37□□□□□ -1.23
RPL40AP0CH08 ESBP6YNL125C 2022 nt7.37□□□□□ -1.23
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms