Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
PdgfrbP05622 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
PdgfrbP05622 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.87■■□□□ 1.41
PdgfrbP05622 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PdgfrbP05622 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
PdgfrbP05622 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
PdgfrbP05622 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.85■■□□□ 1.41
PdgfrbP05622 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PdgfrbP05622 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PdgfrbP05622 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
PdgfrbP05622 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
PdgfrbP05622 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
PdgfrbP05622 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
PdgfrbP05622 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
PdgfrbP05622 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfrbP05622 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.82■■□□□ 1.4
PdgfrbP05622 Gm6821-201ENSMUST00000107540 542 ntBASIC23.82■■□□□ 1.4
PdgfrbP05622 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.82■■□□□ 1.4
PdgfrbP05622 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PdgfrbP05622 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PdgfrbP05622 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.8■■□□□ 1.4
PdgfrbP05622 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
PdgfrbP05622 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PdgfrbP05622 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PdgfrbP05622 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PdgfrbP05622 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.78■■□□□ 1.4
PdgfrbP05622 AC153890.1-201ENSMUST00000220021 2469 ntBASIC23.78■■□□□ 1.4
PdgfrbP05622 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.78■■□□□ 1.4
PdgfrbP05622 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.78■■□□□ 1.4
PdgfrbP05622 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PdgfrbP05622 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
PdgfrbP05622 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PdgfrbP05622 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
PdgfrbP05622 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.75■■□□□ 1.39
PdgfrbP05622 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PdgfrbP05622 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PdgfrbP05622 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.73■■□□□ 1.39
PdgfrbP05622 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PdgfrbP05622 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PdgfrbP05622 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PdgfrbP05622 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.72■■□□□ 1.39
PdgfrbP05622 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PdgfrbP05622 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PdgfrbP05622 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PdgfrbP05622 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.71■■□□□ 1.39
PdgfrbP05622 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
PdgfrbP05622 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PdgfrbP05622 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.71■■□□□ 1.39
PdgfrbP05622 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PdgfrbP05622 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
PdgfrbP05622 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.7■■□□□ 1.38
PdgfrbP05622 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.7■■□□□ 1.38
PdgfrbP05622 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PdgfrbP05622 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PdgfrbP05622 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PdgfrbP05622 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PdgfrbP05622 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
PdgfrbP05622 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PdgfrbP05622 Gm8503-201ENSMUST00000118131 455 ntBASIC23.67■■□□□ 1.38
PdgfrbP05622 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PdgfrbP05622 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.66■■□□□ 1.38
PdgfrbP05622 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PdgfrbP05622 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PdgfrbP05622 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.65■■□□□ 1.38
PdgfrbP05622 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PdgfrbP05622 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.64■■□□□ 1.38
PdgfrbP05622 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.64■■□□□ 1.38
PdgfrbP05622 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.64■■□□□ 1.38
PdgfrbP05622 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
PdgfrbP05622 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
PdgfrbP05622 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PdgfrbP05622 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.62■■□□□ 1.37
PdgfrbP05622 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.61■■□□□ 1.37
PdgfrbP05622 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfrbP05622 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
PdgfrbP05622 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PdgfrbP05622 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PdgfrbP05622 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PdgfrbP05622 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.57■■□□□ 1.36
PdgfrbP05622 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PdgfrbP05622 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
PdgfrbP05622 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
PdgfrbP05622 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
PdgfrbP05622 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.55■■□□□ 1.36
PdgfrbP05622 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.55■■□□□ 1.36
PdgfrbP05622 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
PdgfrbP05622 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
PdgfrbP05622 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PdgfrbP05622 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
PdgfrbP05622 Particl-201ENSMUST00000205370 1560 ntBASIC23.52■■□□□ 1.36
PdgfrbP05622 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
PdgfrbP05622 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PdgfrbP05622 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
PdgfrbP05622 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
PdgfrbP05622 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
PdgfrbP05622 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
PdgfrbP05622 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
PdgfrbP05622 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
PdgfrbP05622 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
PdgfrbP05622 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms