Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P04212 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
P04212 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P04212 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
P04212 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
P04212 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
P04212 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P04212 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
P04212 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P04212 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04212 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P04212 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P04212 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P04212 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04212 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P04212 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P04212 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04212 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P04212 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04212 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P04212 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P04212 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04212 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04212 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
P04212 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.92■□□□□ 0.62
P04212 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04212 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P04212 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P04212 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04212 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
P04212 AC122428.3-201ENSMUST00000215551 2290 ntBASIC18.9■□□□□ 0.62
P04212 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P04212 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.9■□□□□ 0.62
P04212 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
P04212 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.9■□□□□ 0.62
P04212 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
P04212 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
P04212 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04212 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04212 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04212 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
P04212 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04212 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
P04212 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
P04212 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.86■□□□□ 0.61
P04212 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
P04212 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.86■□□□□ 0.61
P04212 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04212 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
P04212 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
P04212 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04212 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
P04212 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04212 Gm30023-201ENSMUST00000197970 889 ntBASIC18.84■□□□□ 0.61
P04212 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
P04212 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04212 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
P04212 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
P04212 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04212 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04212 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.82■□□□□ 0.6
P04212 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04212 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
P04212 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04212 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
P04212 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.81■□□□□ 0.6
P04212 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04212 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04212 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04212 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
P04212 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
P04212 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
P04212 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
P04212 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P04212 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P04212 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
P04212 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04212 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04212 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04212 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P04212 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
P04212 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.76■□□□□ 0.59
P04212 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04212 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P04212 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04212 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04212 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04212 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P04212 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04212 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04212 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P04212 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P04212 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04212 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04212 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P04212 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04212 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P04212 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
P04212 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P04212 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms