Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Gm10553J3QPF1 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Gm10553J3QPF1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Gm10553J3QPF1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Gm10553J3QPF1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.02■□□□□ 0.47
Gm10553J3QPF1 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10553J3QPF1 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10553J3QPF1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10553J3QPF1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Gm10553J3QPF1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10553J3QPF1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Gm10553J3QPF1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Gm10553J3QPF1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm10553J3QPF1 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm10553J3QPF1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm10553J3QPF1 Gm7432-201ENSMUST00000210343 879 ntBASIC17.98■□□□□ 0.47
Gm10553J3QPF1 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm10553J3QPF1 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm10553J3QPF1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm10553J3QPF1 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm10553J3QPF1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.97■□□□□ 0.47
Gm10553J3QPF1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
Gm10553J3QPF1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm10553J3QPF1 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm10553J3QPF1 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm10553J3QPF1 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC17.95■□□□□ 0.46
Gm10553J3QPF1 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Gm10553J3QPF1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Gm10553J3QPF1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Gm10553J3QPF1 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC17.94■□□□□ 0.46
Gm10553J3QPF1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm10553J3QPF1 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Gm10553J3QPF1 Particl-201ENSMUST00000205370 1560 ntBASIC17.93■□□□□ 0.46
Gm10553J3QPF1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm10553J3QPF1 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC17.92■□□□□ 0.46
Gm10553J3QPF1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Gm10553J3QPF1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Gm10553J3QPF1 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10553J3QPF1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
Gm10553J3QPF1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10553J3QPF1 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Gm10553J3QPF1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gm10553J3QPF1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC17.89■□□□□ 0.45
Gm10553J3QPF1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gm10553J3QPF1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm10553J3QPF1 Gm11599-201ENSMUST00000118720 878 ntBASIC17.88■□□□□ 0.45
Gm10553J3QPF1 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.88■□□□□ 0.45
Gm10553J3QPF1 AC131739.1-201ENSMUST00000221692 1245 ntBASIC17.88■□□□□ 0.45
Gm10553J3QPF1 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gm10553J3QPF1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gm10553J3QPF1 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC17.86■□□□□ 0.45
Gm10553J3QPF1 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.86■□□□□ 0.45
Gm10553J3QPF1 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gm10553J3QPF1 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.86■□□□□ 0.45
Gm10553J3QPF1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gm10553J3QPF1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gm10553J3QPF1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm10553J3QPF1 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Gm10553J3QPF1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gm10553J3QPF1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gm10553J3QPF1 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
Gm10553J3QPF1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Gm10553J3QPF1 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC17.83■□□□□ 0.44
Gm10553J3QPF1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Gm10553J3QPF1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm10553J3QPF1 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm10553J3QPF1 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm10553J3QPF1 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm10553J3QPF1 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10553J3QPF1 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Gm10553J3QPF1 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm10553J3QPF1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm10553J3QPF1 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm10553J3QPF1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm10553J3QPF1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm10553J3QPF1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC17.79■□□□□ 0.44
Gm10553J3QPF1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm10553J3QPF1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm10553J3QPF1 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm10553J3QPF1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm10553J3QPF1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm10553J3QPF1 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm10553J3QPF1 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Gm10553J3QPF1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10553J3QPF1 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10553J3QPF1 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm10553J3QPF1 Gm37847-201ENSMUST00000192163 1497 ntBASIC17.76■□□□□ 0.43
Gm10553J3QPF1 Gm31748-201ENSMUST00000194938 1497 ntBASIC17.76■□□□□ 0.43
Gm10553J3QPF1 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.76■□□□□ 0.43
Gm10553J3QPF1 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm10553J3QPF1 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Gm10553J3QPF1 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Gm10553J3QPF1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10553J3QPF1 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10553J3QPF1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10553J3QPF1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10553J3QPF1 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10553J3QPF1 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10553J3QPF1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Gm10553J3QPF1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms