Protein–RNA interactions for Protein: H3BKP8

9930021J03Rik, RIKEN cDNA 9930021J03 gene, mousemouse

Predictions only

Length 2,027 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
9930021J03RikH3BKP8 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
9930021J03RikH3BKP8 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
9930021J03RikH3BKP8 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.13■■□□□ 1.13
9930021J03RikH3BKP8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.13■■□□□ 1.13
9930021J03RikH3BKP8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
9930021J03RikH3BKP8 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.12■■□□□ 1.13
9930021J03RikH3BKP8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
9930021J03RikH3BKP8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
9930021J03RikH3BKP8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
9930021J03RikH3BKP8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
9930021J03RikH3BKP8 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
9930021J03RikH3BKP8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
9930021J03RikH3BKP8 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
9930021J03RikH3BKP8 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
9930021J03RikH3BKP8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
9930021J03RikH3BKP8 Gm7432-201ENSMUST00000210343 879 ntBASIC22.09■■□□□ 1.13
9930021J03RikH3BKP8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
9930021J03RikH3BKP8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
9930021J03RikH3BKP8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.08■■□□□ 1.13
9930021J03RikH3BKP8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
9930021J03RikH3BKP8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
9930021J03RikH3BKP8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
9930021J03RikH3BKP8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
9930021J03RikH3BKP8 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
9930021J03RikH3BKP8 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
9930021J03RikH3BKP8 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC22.06■■□□□ 1.12
9930021J03RikH3BKP8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
9930021J03RikH3BKP8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
9930021J03RikH3BKP8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
9930021J03RikH3BKP8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
9930021J03RikH3BKP8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
9930021J03RikH3BKP8 Particl-201ENSMUST00000205370 1560 ntBASIC22.02■■□□□ 1.12
9930021J03RikH3BKP8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
9930021J03RikH3BKP8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
9930021J03RikH3BKP8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
9930021J03RikH3BKP8 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
9930021J03RikH3BKP8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22■■□□□ 1.11
9930021J03RikH3BKP8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
9930021J03RikH3BKP8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
9930021J03RikH3BKP8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
9930021J03RikH3BKP8 Gm11599-201ENSMUST00000118720 878 ntBASIC21.99■■□□□ 1.11
9930021J03RikH3BKP8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
9930021J03RikH3BKP8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
9930021J03RikH3BKP8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
9930021J03RikH3BKP8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
9930021J03RikH3BKP8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
9930021J03RikH3BKP8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
9930021J03RikH3BKP8 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.97■■□□□ 1.11
9930021J03RikH3BKP8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.96■■□□□ 1.11
9930021J03RikH3BKP8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
9930021J03RikH3BKP8 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
9930021J03RikH3BKP8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
9930021J03RikH3BKP8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
9930021J03RikH3BKP8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
9930021J03RikH3BKP8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
9930021J03RikH3BKP8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
9930021J03RikH3BKP8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
9930021J03RikH3BKP8 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.92■■□□□ 1.1
9930021J03RikH3BKP8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
9930021J03RikH3BKP8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
9930021J03RikH3BKP8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC21.92■■□□□ 1.1
9930021J03RikH3BKP8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
9930021J03RikH3BKP8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
9930021J03RikH3BKP8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.91■■□□□ 1.1
9930021J03RikH3BKP8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
9930021J03RikH3BKP8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
9930021J03RikH3BKP8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
9930021J03RikH3BKP8 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
9930021J03RikH3BKP8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
9930021J03RikH3BKP8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
9930021J03RikH3BKP8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
9930021J03RikH3BKP8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
9930021J03RikH3BKP8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
9930021J03RikH3BKP8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
9930021J03RikH3BKP8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
9930021J03RikH3BKP8 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC21.89■■□□□ 1.09
9930021J03RikH3BKP8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.89■■□□□ 1.09
9930021J03RikH3BKP8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
9930021J03RikH3BKP8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
9930021J03RikH3BKP8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
9930021J03RikH3BKP8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.88■■□□□ 1.09
9930021J03RikH3BKP8 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
9930021J03RikH3BKP8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
9930021J03RikH3BKP8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
9930021J03RikH3BKP8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
9930021J03RikH3BKP8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
9930021J03RikH3BKP8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
9930021J03RikH3BKP8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.85■■□□□ 1.09
9930021J03RikH3BKP8 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
9930021J03RikH3BKP8 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.85■■□□□ 1.09
9930021J03RikH3BKP8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
9930021J03RikH3BKP8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
9930021J03RikH3BKP8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
9930021J03RikH3BKP8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
9930021J03RikH3BKP8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
9930021J03RikH3BKP8 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
9930021J03RikH3BKP8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.83■■□□□ 1.08
9930021J03RikH3BKP8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC21.82■■□□□ 1.08
9930021J03RikH3BKP8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
9930021J03RikH3BKP8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms