Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Gm20708H3BKF4 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm20708H3BKF4 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
Gm20708H3BKF4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm20708H3BKF4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm20708H3BKF4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm20708H3BKF4 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm20708H3BKF4 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20■□□□□ 0.79
Gm20708H3BKF4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20■□□□□ 0.79
Gm20708H3BKF4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm20708H3BKF4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Gm20708H3BKF4 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Gm20708H3BKF4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Gm20708H3BKF4 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.98■□□□□ 0.79
Gm20708H3BKF4 Gm8503-201ENSMUST00000118131 455 ntBASIC19.98■□□□□ 0.79
Gm20708H3BKF4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Gm20708H3BKF4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20708H3BKF4 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20708H3BKF4 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.97■□□□□ 0.79
Gm20708H3BKF4 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Gm20708H3BKF4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm20708H3BKF4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Gm20708H3BKF4 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm20708H3BKF4 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.95■□□□□ 0.78
Gm20708H3BKF4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Gm20708H3BKF4 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.95■□□□□ 0.78
Gm20708H3BKF4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm20708H3BKF4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.94■□□□□ 0.78
Gm20708H3BKF4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.94■□□□□ 0.78
Gm20708H3BKF4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm20708H3BKF4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.93■□□□□ 0.78
Gm20708H3BKF4 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Gm20708H3BKF4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.93■□□□□ 0.78
Gm20708H3BKF4 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.93■□□□□ 0.78
Gm20708H3BKF4 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm20708H3BKF4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm20708H3BKF4 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm20708H3BKF4 AC153890.1-201ENSMUST00000220021 2469 ntBASIC19.91■□□□□ 0.78
Gm20708H3BKF4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm20708H3BKF4 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Gm20708H3BKF4 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm20708H3BKF4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Gm20708H3BKF4 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Gm20708H3BKF4 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.89■□□□□ 0.77
Gm20708H3BKF4 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Gm20708H3BKF4 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm20708H3BKF4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.87■□□□□ 0.77
Gm20708H3BKF4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Gm20708H3BKF4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.86■□□□□ 0.77
Gm20708H3BKF4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Gm20708H3BKF4 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.86■□□□□ 0.77
Gm20708H3BKF4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Gm20708H3BKF4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm20708H3BKF4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Gm20708H3BKF4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Gm20708H3BKF4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Gm20708H3BKF4 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm20708H3BKF4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm20708H3BKF4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm20708H3BKF4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm20708H3BKF4 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.83■□□□□ 0.76
Gm20708H3BKF4 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.83■□□□□ 0.76
Gm20708H3BKF4 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Gm20708H3BKF4 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm20708H3BKF4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm20708H3BKF4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Gm20708H3BKF4 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm20708H3BKF4 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Gm20708H3BKF4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.8■□□□□ 0.76
Gm20708H3BKF4 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Gm20708H3BKF4 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Gm20708H3BKF4 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm20708H3BKF4 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Gm20708H3BKF4 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm20708H3BKF4 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Gm20708H3BKF4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Gm20708H3BKF4 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Gm20708H3BKF4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm20708H3BKF4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Gm20708H3BKF4 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Gm20708H3BKF4 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Gm20708H3BKF4 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Gm20708H3BKF4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Gm20708H3BKF4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Gm20708H3BKF4 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm20708H3BKF4 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Gm20708H3BKF4 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm20708H3BKF4 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Gm20708H3BKF4 Particl-201ENSMUST00000205370 1560 ntBASIC19.74■□□□□ 0.75
Gm20708H3BKF4 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Gm20708H3BKF4 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Gm20708H3BKF4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Gm20708H3BKF4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Gm20708H3BKF4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Gm20708H3BKF4 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.7■□□□□ 0.74
Gm20708H3BKF4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Gm20708H3BKF4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Gm20708H3BKF4 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm20708H3BKF4 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Gm20708H3BKF4 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms