Protein–RNA interactions for Protein: E9Q942

Smim13, Small integral membrane protein 13, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim13E9Q942 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Smim13E9Q942 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim13E9Q942 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim13E9Q942 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Smim13E9Q942 Gm24109-201ENSMUST00000175489 103 ntBASIC16.91■□□□□ 0.3
Smim13E9Q942 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim13E9Q942 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Smim13E9Q942 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Smim13E9Q942 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim13E9Q942 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim13E9Q942 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim13E9Q942 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Smim13E9Q942 Fkbp8-204ENSMUST00000119698 1799 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
Smim13E9Q942 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Smim13E9Q942 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smim13E9Q942 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Smim13E9Q942 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smim13E9Q942 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Smim13E9Q942 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Smim13E9Q942 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Smim13E9Q942 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim13E9Q942 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim13E9Q942 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smim13E9Q942 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC16.87■□□□□ 0.29
Smim13E9Q942 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Smim13E9Q942 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim13E9Q942 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
Smim13E9Q942 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim13E9Q942 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Smim13E9Q942 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Smim13E9Q942 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Smim13E9Q942 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Smim13E9Q942 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Smim13E9Q942 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Smim13E9Q942 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim13E9Q942 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.84■□□□□ 0.29
Smim13E9Q942 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim13E9Q942 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Smim13E9Q942 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim13E9Q942 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC16.83■□□□□ 0.28
Smim13E9Q942 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim13E9Q942 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim13E9Q942 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Smim13E9Q942 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim13E9Q942 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim13E9Q942 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim13E9Q942 Agpat2-201ENSMUST00000028286 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim13E9Q942 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Smim13E9Q942 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Smim13E9Q942 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim13E9Q942 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Smim13E9Q942 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Smim13E9Q942 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smim13E9Q942 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Smim13E9Q942 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Smim13E9Q942 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim13E9Q942 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim13E9Q942 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Smim13E9Q942 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Smim13E9Q942 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
Smim13E9Q942 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.8■□□□□ 0.28
Smim13E9Q942 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.8■□□□□ 0.28
Smim13E9Q942 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC16.8■□□□□ 0.28
Smim13E9Q942 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim13E9Q942 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim13E9Q942 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim13E9Q942 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim13E9Q942 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim13E9Q942 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Smim13E9Q942 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Smim13E9Q942 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim13E9Q942 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim13E9Q942 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Smim13E9Q942 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Smim13E9Q942 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim13E9Q942 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Smim13E9Q942 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim13E9Q942 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Smim13E9Q942 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Smim13E9Q942 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim13E9Q942 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim13E9Q942 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim13E9Q942 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Smim13E9Q942 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Smim13E9Q942 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim13E9Q942 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim13E9Q942 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smim13E9Q942 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim13E9Q942 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Smim13E9Q942 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Smim13E9Q942 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim13E9Q942 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim13E9Q942 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim13E9Q942 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC16.73■□□□□ 0.27
Smim13E9Q942 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim13E9Q942 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim13E9Q942 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Smim13E9Q942 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC16.73■□□□□ 0.27
Smim13E9Q942 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Smim13E9Q942 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms