Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
Krt28A6BLY7 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
Krt28A6BLY7 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
Krt28A6BLY7 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
Krt28A6BLY7 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
Krt28A6BLY7 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.93■■□□□ 1.9
Krt28A6BLY7 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.92■■□□□ 1.9
Krt28A6BLY7 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
Krt28A6BLY7 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Krt28A6BLY7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
Krt28A6BLY7 Gm45364-201ENSMUST00000210883 159 ntBASIC26.9■■□□□ 1.9
Krt28A6BLY7 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
Krt28A6BLY7 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Krt28A6BLY7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Krt28A6BLY7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
Krt28A6BLY7 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Krt28A6BLY7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Krt28A6BLY7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
Krt28A6BLY7 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Krt28A6BLY7 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Krt28A6BLY7 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
Krt28A6BLY7 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
Krt28A6BLY7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26.85■■□□□ 1.89
Krt28A6BLY7 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Krt28A6BLY7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26.83■■□□□ 1.89
Krt28A6BLY7 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
Krt28A6BLY7 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
Krt28A6BLY7 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Krt28A6BLY7 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
Krt28A6BLY7 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.88
Krt28A6BLY7 Gm14523-201ENSMUST00000117260 558 ntBASIC26.81■■□□□ 1.88
Krt28A6BLY7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
Krt28A6BLY7 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.8■■□□□ 1.88
Krt28A6BLY7 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
Krt28A6BLY7 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.79■■□□□ 1.88
Krt28A6BLY7 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
Krt28A6BLY7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
Krt28A6BLY7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.79■■□□□ 1.88
Krt28A6BLY7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
Krt28A6BLY7 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
Krt28A6BLY7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC26.77■■□□□ 1.88
Krt28A6BLY7 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Krt28A6BLY7 Gm22567-201ENSMUST00000175542 342 ntBASIC26.76■■□□□ 1.87
Krt28A6BLY7 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
Krt28A6BLY7 Gm5067-201ENSMUST00000170449 1009 ntBASIC26.74■■□□□ 1.87
Krt28A6BLY7 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Krt28A6BLY7 Gm13889-201ENSMUST00000099689 1386 ntBASIC26.73■■□□□ 1.87
Krt28A6BLY7 Gm12818-201ENSMUST00000117562 1349 ntBASIC26.73■■□□□ 1.87
Krt28A6BLY7 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC26.73■■□□□ 1.87
Krt28A6BLY7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
Krt28A6BLY7 Gm37136-201ENSMUST00000194368 194 ntBASIC26.72■■□□□ 1.87
Krt28A6BLY7 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Krt28A6BLY7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC26.7■■□□□ 1.86
Krt28A6BLY7 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Krt28A6BLY7 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
Krt28A6BLY7 Gm5812-201ENSMUST00000061073 957 ntBASIC26.7■■□□□ 1.86
Krt28A6BLY7 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Krt28A6BLY7 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Krt28A6BLY7 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC26.68■■□□□ 1.86
Krt28A6BLY7 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Krt28A6BLY7 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Krt28A6BLY7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC26.67■■□□□ 1.86
Krt28A6BLY7 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC26.67■■□□□ 1.86
Krt28A6BLY7 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.67■■□□□ 1.86
Krt28A6BLY7 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Krt28A6BLY7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Krt28A6BLY7 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Krt28A6BLY7 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Krt28A6BLY7 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Krt28A6BLY7 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Krt28A6BLY7 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
Krt28A6BLY7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Krt28A6BLY7 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Krt28A6BLY7 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Krt28A6BLY7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Krt28A6BLY7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Krt28A6BLY7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Krt28A6BLY7 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Krt28A6BLY7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Krt28A6BLY7 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Krt28A6BLY7 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Krt28A6BLY7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Krt28A6BLY7 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Krt28A6BLY7 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC26.61■■□□□ 1.85
Krt28A6BLY7 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Krt28A6BLY7 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.59■■□□□ 1.85
Krt28A6BLY7 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
Krt28A6BLY7 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.58■■□□□ 1.85
Krt28A6BLY7 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.58■■□□□ 1.85
Krt28A6BLY7 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Krt28A6BLY7 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC26.57■■□□□ 1.84
Krt28A6BLY7 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Krt28A6BLY7 Gm5921-201ENSMUST00000075898 882 ntBASIC26.57■■□□□ 1.84
Krt28A6BLY7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Krt28A6BLY7 Gm10420-201ENSMUST00000121713 882 ntBASIC26.56■■□□□ 1.84
Retrieved 100 of 76,532 protein–RNA pairs in 90.4 ms