Protein–RNA interactions for Protein: A0A140LHH9

Gm35339, Predicted gene, 35339, mousemouse

Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35339A0A140LHH9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC52.07■■■■■ 5.93
Gm35339A0A140LHH9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC52.07■■■■■ 5.93
Gm35339A0A140LHH9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC52.06■■■■■ 5.92
Gm35339A0A140LHH9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC52.04■■■■■ 5.92
Gm35339A0A140LHH9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC52.03■■■■■ 5.92
Gm35339A0A140LHH9 Mir3960-201ENSMUST00000198213 73 ntBASIC52.03■■■■■ 5.92
Gm35339A0A140LHH9 Gm16437-201ENSMUST00000025669 507 ntBASIC52.03■■■■■ 5.92
Gm35339A0A140LHH9 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC52.03■■■■■ 5.92
Gm35339A0A140LHH9 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC52.02■■■■■ 5.92
Gm35339A0A140LHH9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC52.01■■■■■ 5.92
Gm35339A0A140LHH9 Gm7332-201ENSMUST00000118351 454 ntBASIC52■■■■■ 5.92
Gm35339A0A140LHH9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC51.98■■■■■ 5.91
Gm35339A0A140LHH9 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC51.96■■■■■ 5.91
Gm35339A0A140LHH9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC51.93■■■■■ 5.9
Gm35339A0A140LHH9 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC51.93■■■■■ 5.9
Gm35339A0A140LHH9 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC51.92■■■■■ 5.9
Gm35339A0A140LHH9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC51.91■■■■■ 5.9
Gm35339A0A140LHH9 AC151971.4-201ENSMUST00000214717 704 ntBASIC51.91■■■■■ 5.9
Gm35339A0A140LHH9 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC51.91■■■■■ 5.9
Gm35339A0A140LHH9 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC51.9■■■■■ 5.9
Gm35339A0A140LHH9 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC51.89■■■■■ 5.9
Gm35339A0A140LHH9 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC51.88■■■■■ 5.9
Gm35339A0A140LHH9 Gm37136-201ENSMUST00000194368 194 ntBASIC51.87■■■■■ 5.89
Gm35339A0A140LHH9 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC51.87■■■■■ 5.89
Gm35339A0A140LHH9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC51.84■■■■■ 5.89
Gm35339A0A140LHH9 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC51.83■■■■■ 5.89
Gm35339A0A140LHH9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC51.83■■■■■ 5.89
Gm35339A0A140LHH9 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC51.82■■■■■ 5.89
Gm35339A0A140LHH9 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC51.82■■■■■ 5.89
Gm35339A0A140LHH9 Gm14523-201ENSMUST00000117260 558 ntBASIC51.81■■■■■ 5.88
Gm35339A0A140LHH9 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC51.81■■■■■ 5.88
Gm35339A0A140LHH9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC51.8■■■■■ 5.88
Gm35339A0A140LHH9 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC51.8■■■■■ 5.88
Gm35339A0A140LHH9 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC51.79■■■■■ 5.88
Gm35339A0A140LHH9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC51.78■■■■■ 5.88
Gm35339A0A140LHH9 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC51.78■■■■■ 5.88
Gm35339A0A140LHH9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC51.76■■■■■ 5.88
Gm35339A0A140LHH9 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC51.76■■■■■ 5.88
Gm35339A0A140LHH9 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC51.75■■■■■ 5.88
Gm35339A0A140LHH9 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC51.73■■■■■ 5.87
Gm35339A0A140LHH9 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC51.72■■■■■ 5.87
Gm35339A0A140LHH9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC51.71■■■■■ 5.87
Gm35339A0A140LHH9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC51.7■■■■■ 5.87
Gm35339A0A140LHH9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC51.69■■■■■ 5.87
Gm35339A0A140LHH9 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC51.69■■■■■ 5.87
Gm35339A0A140LHH9 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC51.68■■■■■ 5.86
Gm35339A0A140LHH9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC51.67■■■■■ 5.86
Gm35339A0A140LHH9 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC51.64■■■■■ 5.86
Gm35339A0A140LHH9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC51.64■■■■■ 5.86
Gm35339A0A140LHH9 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC51.64■■■■■ 5.86
Gm35339A0A140LHH9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC51.62■■■■■ 5.85
Gm35339A0A140LHH9 Gm5812-201ENSMUST00000061073 957 ntBASIC51.62■■■■■ 5.85
Gm35339A0A140LHH9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC51.61■■■■■ 5.85
Gm35339A0A140LHH9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC51.6■■■■■ 5.85
Gm35339A0A140LHH9 Gm13889-201ENSMUST00000099689 1386 ntBASIC51.6■■■■■ 5.85
Gm35339A0A140LHH9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC51.59■■■■■ 5.85
Gm35339A0A140LHH9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC51.59■■■■■ 5.85
Gm35339A0A140LHH9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC51.59■■■■■ 5.85
Gm35339A0A140LHH9 AC122317.2-201ENSMUST00000218708 1248 ntBASIC51.59■■■■■ 5.85
Gm35339A0A140LHH9 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC51.59■■■■■ 5.85
Gm35339A0A140LHH9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC51.58■■■■■ 5.85
Gm35339A0A140LHH9 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC51.57■■■■■ 5.85
Gm35339A0A140LHH9 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC51.57■■■■■ 5.85
Gm35339A0A140LHH9 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC51.57■■■■■ 5.85
Gm35339A0A140LHH9 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC51.57■■■■■ 5.85
Gm35339A0A140LHH9 Gm12818-201ENSMUST00000117562 1349 ntBASIC51.57■■■■■ 5.85
Gm35339A0A140LHH9 Gm22567-201ENSMUST00000175542 342 ntBASIC51.56■■■■■ 5.85
Gm35339A0A140LHH9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC51.56■■■■■ 5.84
Gm35339A0A140LHH9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC51.54■■■■■ 5.84
Gm35339A0A140LHH9 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC51.53■■■■■ 5.84
Gm35339A0A140LHH9 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC51.53■■■■■ 5.84
Gm35339A0A140LHH9 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC51.53■■■■■ 5.84
Gm35339A0A140LHH9 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC51.53■■■■■ 5.84
Gm35339A0A140LHH9 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC51.53■■■■■ 5.84
Gm35339A0A140LHH9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC51.51■■■■■ 5.84
Gm35339A0A140LHH9 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC51.49■■■■■ 5.83
Gm35339A0A140LHH9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC51.49■■■■■ 5.83
Gm35339A0A140LHH9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC51.47■■■■■ 5.83
Gm35339A0A140LHH9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC51.46■■■■■ 5.83
Gm35339A0A140LHH9 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC51.46■■■■■ 5.83
Gm35339A0A140LHH9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC51.45■■■■■ 5.83
Gm35339A0A140LHH9 Gm9905-201ENSMUST00000065740 1845 ntBASIC51.44■■■■■ 5.83
Gm35339A0A140LHH9 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC51.44■■■■■ 5.83
Gm35339A0A140LHH9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC51.42■■■■■ 5.82
Gm35339A0A140LHH9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC51.42■■■■■ 5.82
Gm35339A0A140LHH9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC51.41■■■■■ 5.82
Gm35339A0A140LHH9 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC51.4■■■■■ 5.82
Gm35339A0A140LHH9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC51.4■■■■■ 5.82
Gm35339A0A140LHH9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC51.39■■■■■ 5.82
Gm35339A0A140LHH9 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC51.39■■■■■ 5.82
Gm35339A0A140LHH9 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC51.38■■■■■ 5.82
Gm35339A0A140LHH9 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC51.38■■■■■ 5.82
Gm35339A0A140LHH9 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC51.38■■■■■ 5.82
Gm35339A0A140LHH9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC51.37■■■■■ 5.81
Gm35339A0A140LHH9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC51.36■■■■■ 5.81
Gm35339A0A140LHH9 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC51.36■■■■■ 5.81
Gm35339A0A140LHH9 Gm5921-201ENSMUST00000075898 882 ntBASIC51.36■■■■■ 5.81
Gm35339A0A140LHH9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC51.36■■■■■ 5.81
Gm35339A0A140LHH9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC51.35■■■■■ 5.81
Gm35339A0A140LHH9 Gm15039-201ENSMUST00000118914 875 ntBASIC51.32■■■■■ 5.81
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms