Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45855-201ENSMUST00000212546 880 ntBASIC20.66■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.66■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.66■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.66■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.66■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm30023-201ENSMUST00000197970 889 ntBASIC20.65■□□□□ 0.9
Trav15d-2-dv6d-2A0A0G2JGQ7 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.63■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC20.62■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.6■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav15d-2-dv6d-2A0A0G2JGQ7 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.55■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.55■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.52■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trav15d-2-dv6d-2A0A0G2JGQ7 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Particl-201ENSMUST00000205370 1560 ntBASIC20.51■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.48■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.47■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Trav15d-2-dv6d-2A0A0G2JGQ7 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms