Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-4A0A0G2JFX3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-4A0A0G2JFX3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav13d-4A0A0G2JFX3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-4A0A0G2JFX3 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav13d-4A0A0G2JFX3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC16.07■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-4A0A0G2JFX3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav13d-4A0A0G2JFX3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav13d-4A0A0G2JFX3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-4A0A0G2JFX3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav13d-4A0A0G2JFX3 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC16■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trav13d-4A0A0G2JFX3 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC15.98■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Gm43863-201ENSMUST00000203822 1192 ntBASIC15.98■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.98■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav13d-4A0A0G2JFX3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav13d-4A0A0G2JFX3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-4A0A0G2JFX3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-4A0A0G2JFX3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-4A0A0G2JFX3 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC15.93■□□□□ 0.14
Trav13d-4A0A0G2JFX3 AC157572.2-201ENSMUST00000226970 908 ntBASIC15.93■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC15.92■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Trav13d-4A0A0G2JFX3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
Trav13d-4A0A0G2JFX3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav13d-4A0A0G2JFX3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.14
Trav13d-4A0A0G2JFX3 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-4A0A0G2JFX3 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC15.89■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav13d-4A0A0G2JFX3 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms