Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trav13-2A0A075B649 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Trav13-2A0A075B649 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13-2A0A075B649 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13-2A0A075B649 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav13-2A0A075B649 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav13-2A0A075B649 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav13-2A0A075B649 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav13-2A0A075B649 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav13-2A0A075B649 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13-2A0A075B649 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13-2A0A075B649 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13-2A0A075B649 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav13-2A0A075B649 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-2A0A075B649 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-2A0A075B649 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav13-2A0A075B649 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-2A0A075B649 Gm16148-201ENSMUST00000119653 893 ntBASIC15.68■□□□□ 0.1
Trav13-2A0A075B649 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-2A0A075B649 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav13-2A0A075B649 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13-2A0A075B649 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13-2A0A075B649 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav13-2A0A075B649 Gm24804-201ENSMUST00000174982 85 ntBASIC15.66■□□□□ 0.1
Trav13-2A0A075B649 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13-2A0A075B649 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav13-2A0A075B649 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13-2A0A075B649 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13-2A0A075B649 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13-2A0A075B649 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13-2A0A075B649 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13-2A0A075B649 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trav13-2A0A075B649 AC122428.3-201ENSMUST00000215551 2290 ntBASIC15.65■□□□□ 0.1
Trav13-2A0A075B649 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trav13-2A0A075B649 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.64■□□□□ 0.09
Trav13-2A0A075B649 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13-2A0A075B649 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13-2A0A075B649 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trav13-2A0A075B649 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trav13-2A0A075B649 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-2A0A075B649 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-2A0A075B649 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trav13-2A0A075B649 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13-2A0A075B649 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Trav13-2A0A075B649 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13-2A0A075B649 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13-2A0A075B649 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trav13-2A0A075B649 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trav13-2A0A075B649 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Trav13-2A0A075B649 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13-2A0A075B649 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trav13-2A0A075B649 AC124392.1-201ENSMUST00000225172 5324 ntBASIC15.6■□□□□ 0.09
Trav13-2A0A075B649 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-2A0A075B649 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-2A0A075B649 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-2A0A075B649 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-2A0A075B649 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Trav13-2A0A075B649 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13-2A0A075B649 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Trav13-2A0A075B649 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Trav13-2A0A075B649 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Trav13-2A0A075B649 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Trav13-2A0A075B649 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13-2A0A075B649 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13-2A0A075B649 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Trav13-2A0A075B649 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Trav13-2A0A075B649 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13-2A0A075B649 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13-2A0A075B649 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Trav13-2A0A075B649 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav13-2A0A075B649 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.55■□□□□ 0.08
Trav13-2A0A075B649 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Trav13-2A0A075B649 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13-2A0A075B649 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav13-2A0A075B649 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Trav13-2A0A075B649 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13-2A0A075B649 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Trav13-2A0A075B649 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-2A0A075B649 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-2A0A075B649 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-2A0A075B649 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC15.53■□□□□ 0.08
Trav13-2A0A075B649 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Trav13-2A0A075B649 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Trav13-2A0A075B649 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-2A0A075B649 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Trav13-2A0A075B649 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Trav13-2A0A075B649 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13-2A0A075B649 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13-2A0A075B649 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13-2A0A075B649 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Trav13-2A0A075B649 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13-2A0A075B649 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Trav13-2A0A075B649 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13-2A0A075B649 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13-2A0A075B649 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Trav13-2A0A075B649 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trav13-2A0A075B649 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13-2A0A075B649 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Trav13-2A0A075B649 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Trav13-2A0A075B649 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms