Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Trav15d-1-dv6d-1A0A075B624 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.93■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC19.9■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Trav15d-1-dv6d-1A0A075B624 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.89■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.88■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Trav15d-1-dv6d-1A0A075B624 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.82■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.81■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.8■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 AC157572.2-201ENSMUST00000226970 908 ntBASIC19.8■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Trav15d-1-dv6d-1A0A075B624 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.76■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC19.74■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Trav15d-1-dv6d-1A0A075B624 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms