Protein–RNA interactions for Protein: A0A075B622

Trav10n, T cell receptor alpha variable 10N (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav10nA0A075B622 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Trav10nA0A075B622 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Trav10nA0A075B622 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Trav10nA0A075B622 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.89■□□□□ 0.93
Trav10nA0A075B622 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav10nA0A075B622 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Trav10nA0A075B622 Gm9939-201ENSMUST00000067161 1154 ntBASIC20.88■□□□□ 0.93
Trav10nA0A075B622 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav10nA0A075B622 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Trav10nA0A075B622 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav10nA0A075B622 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.87■□□□□ 0.93
Trav10nA0A075B622 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Trav10nA0A075B622 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Trav10nA0A075B622 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.86■□□□□ 0.93
Trav10nA0A075B622 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Trav10nA0A075B622 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.85■□□□□ 0.93
Trav10nA0A075B622 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Trav10nA0A075B622 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Trav10nA0A075B622 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.84■□□□□ 0.93
Trav10nA0A075B622 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav10nA0A075B622 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Trav10nA0A075B622 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Trav10nA0A075B622 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Trav10nA0A075B622 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav10nA0A075B622 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Trav10nA0A075B622 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.82■□□□□ 0.92
Trav10nA0A075B622 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trav10nA0A075B622 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Trav10nA0A075B622 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
Trav10nA0A075B622 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Trav10nA0A075B622 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC20.81■□□□□ 0.92
Trav10nA0A075B622 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Trav10nA0A075B622 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC20.8■□□□□ 0.92
Trav10nA0A075B622 Gm6821-201ENSMUST00000107540 542 ntBASIC20.79■□□□□ 0.92
Trav10nA0A075B622 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.78■□□□□ 0.92
Trav10nA0A075B622 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Trav10nA0A075B622 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Trav10nA0A075B622 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.77■□□□□ 0.92
Trav10nA0A075B622 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Trav10nA0A075B622 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.76■□□□□ 0.91
Trav10nA0A075B622 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav10nA0A075B622 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Trav10nA0A075B622 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Trav10nA0A075B622 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Trav10nA0A075B622 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
Trav10nA0A075B622 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Trav10nA0A075B622 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav10nA0A075B622 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.73■□□□□ 0.91
Trav10nA0A075B622 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Trav10nA0A075B622 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Trav10nA0A075B622 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav10nA0A075B622 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Trav10nA0A075B622 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.72■□□□□ 0.91
Trav10nA0A075B622 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.72■□□□□ 0.91
Trav10nA0A075B622 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Trav10nA0A075B622 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Trav10nA0A075B622 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Trav10nA0A075B622 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC20.7■□□□□ 0.9
Trav10nA0A075B622 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav10nA0A075B622 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Trav10nA0A075B622 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Trav10nA0A075B622 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.69■□□□□ 0.9
Trav10nA0A075B622 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Trav10nA0A075B622 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trav10nA0A075B622 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Trav10nA0A075B622 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav10nA0A075B622 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Trav10nA0A075B622 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav10nA0A075B622 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Trav10nA0A075B622 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC20.66■□□□□ 0.9
Trav10nA0A075B622 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Trav10nA0A075B622 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.65■□□□□ 0.9
Trav10nA0A075B622 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.64■□□□□ 0.89
Trav10nA0A075B622 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.64■□□□□ 0.89
Trav10nA0A075B622 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav10nA0A075B622 Gm8503-201ENSMUST00000118131 455 ntBASIC20.63■□□□□ 0.89
Trav10nA0A075B622 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC20.63■□□□□ 0.89
Trav10nA0A075B622 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.63■□□□□ 0.89
Trav10nA0A075B622 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Trav10nA0A075B622 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Trav10nA0A075B622 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Trav10nA0A075B622 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav10nA0A075B622 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Trav10nA0A075B622 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trav10nA0A075B622 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav10nA0A075B622 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Trav10nA0A075B622 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trav10nA0A075B622 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.59■□□□□ 0.89
Trav10nA0A075B622 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trav10nA0A075B622 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trav10nA0A075B622 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trav10nA0A075B622 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms