Protein–RNA interactions for Protein: A0A075B604

Trav7n-5, T cell receptor alpha variable 7D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-5A0A075B604 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Trav7n-5A0A075B604 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.42■□□□□ 0.7
Trav7n-5A0A075B604 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Trav7n-5A0A075B604 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav7n-5A0A075B604 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Trav7n-5A0A075B604 Particl-201ENSMUST00000205370 1560 ntBASIC19.41■□□□□ 0.7
Trav7n-5A0A075B604 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav7n-5A0A075B604 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC19.41■□□□□ 0.7
Trav7n-5A0A075B604 Gm7432-201ENSMUST00000210343 879 ntBASIC19.41■□□□□ 0.7
Trav7n-5A0A075B604 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Trav7n-5A0A075B604 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Trav7n-5A0A075B604 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Trav7n-5A0A075B604 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.39■□□□□ 0.69
Trav7n-5A0A075B604 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav7n-5A0A075B604 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Trav7n-5A0A075B604 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Trav7n-5A0A075B604 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Trav7n-5A0A075B604 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trav7n-5A0A075B604 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav7n-5A0A075B604 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav7n-5A0A075B604 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trav7n-5A0A075B604 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trav7n-5A0A075B604 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC19.36■□□□□ 0.69
Trav7n-5A0A075B604 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
Trav7n-5A0A075B604 AC131739.1-201ENSMUST00000221692 1245 ntBASIC19.36■□□□□ 0.69
Trav7n-5A0A075B604 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC19.34■□□□□ 0.69
Trav7n-5A0A075B604 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC19.33■□□□□ 0.68
Trav7n-5A0A075B604 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Trav7n-5A0A075B604 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.32■□□□□ 0.68
Trav7n-5A0A075B604 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Trav7n-5A0A075B604 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Trav7n-5A0A075B604 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav7n-5A0A075B604 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Trav7n-5A0A075B604 Gm11599-201ENSMUST00000118720 878 ntBASIC19.3■□□□□ 0.68
Trav7n-5A0A075B604 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Trav7n-5A0A075B604 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Trav7n-5A0A075B604 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7n-5A0A075B604 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7n-5A0A075B604 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7n-5A0A075B604 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Trav7n-5A0A075B604 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Trav7n-5A0A075B604 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Trav7n-5A0A075B604 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav7n-5A0A075B604 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav7n-5A0A075B604 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Trav7n-5A0A075B604 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav7n-5A0A075B604 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trav7n-5A0A075B604 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trav7n-5A0A075B604 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trav7n-5A0A075B604 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.23■□□□□ 0.67
Trav7n-5A0A075B604 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.23■□□□□ 0.67
Trav7n-5A0A075B604 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.23■□□□□ 0.67
Trav7n-5A0A075B604 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trav7n-5A0A075B604 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trav7n-5A0A075B604 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trav7n-5A0A075B604 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
Trav7n-5A0A075B604 Gm37136-201ENSMUST00000194368 194 ntBASIC19.22■□□□□ 0.67
Trav7n-5A0A075B604 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trav7n-5A0A075B604 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trav7n-5A0A075B604 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trav7n-5A0A075B604 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7n-5A0A075B604 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7n-5A0A075B604 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7n-5A0A075B604 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7n-5A0A075B604 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trav7n-5A0A075B604 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC19.21■□□□□ 0.67
Trav7n-5A0A075B604 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7n-5A0A075B604 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trav7n-5A0A075B604 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trav7n-5A0A075B604 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.2■□□□□ 0.66
Trav7n-5A0A075B604 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7n-5A0A075B604 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7n-5A0A075B604 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC19.2■□□□□ 0.66
Trav7n-5A0A075B604 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trav7n-5A0A075B604 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trav7n-5A0A075B604 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trav7n-5A0A075B604 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC19.19■□□□□ 0.66
Trav7n-5A0A075B604 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav7n-5A0A075B604 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav7n-5A0A075B604 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trav7n-5A0A075B604 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav7n-5A0A075B604 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trav7n-5A0A075B604 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Trav7n-5A0A075B604 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Trav7n-5A0A075B604 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Trav7n-5A0A075B604 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trav7n-5A0A075B604 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav7n-5A0A075B604 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Trav7n-5A0A075B604 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trav7n-5A0A075B604 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Trav7n-5A0A075B604 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Trav7n-5A0A075B604 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Trav7n-5A0A075B604 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Trav7n-5A0A075B604 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav7n-5A0A075B604 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Trav7n-5A0A075B604 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC19.1■□□□□ 0.65
Trav7n-5A0A075B604 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC19.1■□□□□ 0.65
Trav7n-5A0A075B604 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Trav7n-5A0A075B604 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Trav7n-5A0A075B604 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms