Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AL512310.9-201ENST00000553311 948 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC015720.2-201ENST00000567709 334 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AL356121.2-201ENST00000624715 780 ntBASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KCNIP3Q9Y2W7 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 RNA5SP46-201ENST00000362370 120 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 SLC35E1P1-201ENST00000419313 864 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC092570.3-201ENST00000420113 693 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 E2F6P2-201ENST00000420708 748 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC092162.1-201ENST00000432828 434 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 FMO7P-201ENST00000436045 768 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC069285.2-201ENST00000440210 275 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AL606490.8-201ENST00000441624 319 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 GEMIN8P3-201ENST00000445417 720 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 EEF1B2P6-201ENST00000445713 673 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 RPL10P17-201ENST00000453852 316 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 RNU6-775P-201ENST00000459318 96 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 RNU6-491P-201ENST00000516099 110 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC060775.1-201ENST00000518241 520 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 MYL12AP1-201ENST00000518490 515 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC005868.1-201ENST00000536421 331 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC006512.2-201ENST00000543250 486 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC068305.2-201ENST00000550567 1205 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 BLZF2P-201ENST00000553776 1130 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 MTATP6P25-201ENST00000574491 261 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 WBP1LP8-201ENST00000617401 327 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 CASC19-222ENST00000641321 1173 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC068446.1-201ENST00000556425 1549 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 AC010329.2-201ENST00000595195 2737 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.19□□□□□ -1.74
KCNIP3Q9Y2W7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 RNA5SP132-201ENST00000364725 118 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 GCNT6-201ENST00000379591 934 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 RNU6-152P-201ENST00000384037 107 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 AL035696.2-201ENST00000407941 709 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 EIF4A1P3-201ENST00000411521 244 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 AL512504.1-201ENST00000415494 778 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 QRSL1P2-201ENST00000418582 964 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 BTF3P9-201ENST00000418784 283 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 TNPO1P1-201ENST00000423641 1138 ntBASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.18□□□□□ -1.74
KCNIP3Q9Y2W7 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms