Protein–RNA interactions for Protein: Q9ULT6

ZNRF3, E3 ubiquitin-protein ligase ZNRF3, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNRF3Q9ULT6 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC6.95□□□□□ -1.3
ZNRF3Q9ULT6 AC023421.1-201ENST00000590535 1785 ntBASIC6.95□□□□□ -1.3
ZNRF3Q9ULT6 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
ZNRF3Q9ULT6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 OR51E1-201ENST00000396952 3612 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 Y_RNA.77-201ENST00000362962 107 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 RNA5SP333-201ENST00000363466 118 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 RNA5SP334-201ENST00000364825 118 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 RNU1-77P-201ENST00000390868 162 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 ATP5F1P3-201ENST00000397213 657 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 RPS3AP26-201ENST00000398259 784 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AL021407.1-201ENST00000404531 386 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 RN7SKP151-201ENST00000410230 316 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AC007562.1-201ENST00000421819 517 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AL593851.1-201ENST00000426171 157 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 VN1R54P-201ENST00000435210 1049 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AC023274.2-201ENST00000445264 521 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 FAR2P1-206ENST00000449736 709 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 CDC42P1-201ENST00000456658 548 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 RN7SL860P-201ENST00000473738 223 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 RPL23AP37-201ENST00000479658 549 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 OR11I1P-201ENST00000486033 954 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AC090058.1-201ENST00000498788 435 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 CYP4F27P-201ENST00000514557 494 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 PRELID3BP4-201ENST00000515476 571 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 MIR2117-201ENST00000516780 80 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AC007599.1-201ENST00000568688 1174 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 MIR5708-201ENST00000579723 85 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AC090616.2-202ENST00000584248 222 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 AC122133.1-201ENST00000613964 233 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 SORBS1-203ENST00000354106 3015 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 SGO1P2-201ENST00000429458 1589 ntBASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
ZNRF3Q9ULT6 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 SEC63P2-201ENST00000503863 1939 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 AL137918.1-201ENST00000624542 1922 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 AC005294.1-201ENST00000355509 281 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 RNA5SP30-201ENST00000365552 115 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 AL079342.2-201ENST00000403367 482 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 AL390774.1-201ENST00000411924 246 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 VTA1P1-201ENST00000414044 866 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 MTCYBP34-201ENST00000439552 670 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 AL138878.2-201ENST00000440581 1241 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 CEACAMP7-201ENST00000444105 496 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 RPL35AP28-201ENST00000459730 331 ntBASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
ZNRF3Q9ULT6 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms