Protein–RNA interactions for Protein: Q9UBR4

LHX3, LIM/homeobox protein Lhx3, humanhuman

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3Q9UBR4 SNORA48.9-201ENST00000516419 162 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 OR7E10P-201ENST00000526420 991 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 AC008147.3-201ENST00000548666 354 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 AL049830.4-201ENST00000555149 351 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 MIR3667-201ENST00000581025 74 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 MIR4480-201ENST00000582492 71 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 BNIP3P32-201ENST00000600015 554 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 OR51C1P-201ENST00000608504 942 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 SMG1P6-201ENST00000532337 2930 ntBASIC4.92□□□□□ -1.62
LHX3Q9UBR4 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
LHX3Q9UBR4 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AL031595.2-201ENST00000624215 19071 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 RNU6-729P-201ENST00000384399 107 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 MIR937-201ENST00000401271 86 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 RPL10P10-201ENST00000403509 664 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AC114755.2-201ENST00000413520 361 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 RBMY2KP-201ENST00000418221 992 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AC092162.1-201ENST00000432828 434 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 FTLP19-201ENST00000433300 394 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AC073648.4-201ENST00000442655 781 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 SEPT7P3-201ENST00000455017 621 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AC090602.1-201ENST00000469695 252 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 RN7SL558P-201ENST00000497468 299 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 ENPP7P9-201ENST00000514456 627 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 Y_RNA.719-201ENST00000517156 106 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AL359219.2-201ENST00000555184 348 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 BX323046.1-201ENST00000610145 535 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 AC016911.1-201ENST00000613297 452 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 NCLP2-201ENST00000416078 1462 ntBASIC4.91□□□□□ -1.62
LHX3Q9UBR4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.91□□□□□ -1.62
LHX3Q9UBR4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
LHX3Q9UBR4 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.9□□□□□ -1.62
LHX3Q9UBR4 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
LHX3Q9UBR4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.9□□□□□ -1.62
LHX3Q9UBR4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
LHX3Q9UBR4 MIR7-1-201ENST00000384871 110 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 SNORA79B-201ENST00000410557 148 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 RN7SKP100-201ENST00000411258 284 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.9□□□□□ -1.63
LHX3Q9UBR4 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX3Q9UBR4 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX3Q9UBR4 STRADBP1-201ENST00000478954 1281 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.9□□□□□ -1.63
LHX3Q9UBR4 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
LHX3Q9UBR4 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.9□□□□□ -1.63
LHX3Q9UBR4 SCARNA22-201ENST00000503991 125 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 RNU6-709P-201ENST00000517257 104 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 AP001880.2-201ENST00000538233 448 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 UBE2FP2-201ENST00000566646 462 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 RN7SL802P-201ENST00000577858 299 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 SNORA74C-1-201ENST00000580726 201 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.9□□□□□ -1.63
LHX3Q9UBR4 FAM106CP-201ENST00000582212 507 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.9□□□□□ -1.63
LHX3Q9UBR4 AC022726.1-201ENST00000587475 207 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 AC245128.3-201ENST00000594721 748 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 AC090953.1-201ENST00000604305 1092 ntBASIC4.9□□□□□ -1.63
LHX3Q9UBR4 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.9□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 154.3 ms