Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AC104971.1-201ENST00000495117 578 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 DUX4L52-201ENST00000549363 777 ntBASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
TREX1Q9NSU2 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 TCP1P3-201ENST00000414406 1498 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC107068.1-201ENST00000563286 4218 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC013470.3-201ENST00000420252 1194 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC007559.1-201ENST00000428736 355 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AL627308.1-201ENST00000435693 821 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 CYCSP11-201ENST00000436426 315 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 RPS26P2-201ENST00000440331 348 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC010733.1-201ENST00000451515 401 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 RPS5P7-201ENST00000456664 608 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 SCARNA22-201ENST00000503991 125 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC091868.1-201ENST00000508746 304 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 RN7SKP46-201ENST00000515942 234 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC021006.3-201ENST00000530771 192 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 RARSP1-201ENST00000542842 1418 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC133555.2-201ENST00000550213 292 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC079075.1-201ENST00000559543 878 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC011487.3-201ENST00000593607 453 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AL158062.1-201ENST00000619632 745 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 SAMMSON-226ENST00000642089 1582 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 THAP12P8-201ENST00000447914 2115 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
TREX1Q9NSU2 AC007382.1-201ENST00000624376 2618 ntBASIC4.76□□□□□ -1.65
TREX1Q9NSU2 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 IRF5P1-201ENST00000504852 2164 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 RN7SKP74-201ENST00000362849 309 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 OR13Z1P-201ENST00000416141 834 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 CEACAMP7-201ENST00000444105 496 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 OR52J1P-201ENST00000450596 932 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 snoU13.20-201ENST00000459180 104 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 RNU1-6P-201ENST00000516290 144 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC130352.1-201ENST00000602979 661 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 FAM27B-201ENST00000610601 213 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC087385.3-201ENST00000620477 187 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC068870.2-201ENST00000620635 389 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 AC018445.2-201ENST00000622987 260 ntBASIC4.75□□□□□ -1.65
TREX1Q9NSU2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
TREX1Q9NSU2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms