Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 TCP11X1-202ENST00000622971 1372 ntBASIC4.98□□□□□ -1.61
CISHQ9NSE2 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
CISHQ9NSE2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CISHQ9NSE2 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AL731566.1-201ENST00000620490 1937 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AC103591.2-201ENST00000265259 766 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CISHQ9NSE2 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CISHQ9NSE2 PEX12P1-201ENST00000400284 1048 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 NPM1P40-201ENST00000412758 733 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 EIF4A1P1-201ENST00000420241 934 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 REREP1Y-201ENST00000422655 198 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 REREP2Y-201ENST00000439103 200 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 CYCSP34-201ENST00000458172 304 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 RPL12P20-201ENST00000475538 479 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AC012123.2-201ENST00000485809 248 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 AC023424.1-201ENST00000496058 459 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AC015912.2-201ENST00000571053 181 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 IMMP1LP1-201ENST00000605170 488 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AC015871.5-202ENST00000623252 701 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
CISHQ9NSE2 AC135352.1-201ENST00000506173 1418 ntBASIC4.97□□□□□ -1.61
CISHQ9NSE2 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
CISHQ9NSE2 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.96□□□□□ -1.61
CISHQ9NSE2 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.96□□□□□ -1.62
CISHQ9NSE2 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.96□□□□□ -1.62
CISHQ9NSE2 FABP7P2-201ENST00000429946 379 ntBASIC4.96□□□□□ -1.62
CISHQ9NSE2 Z80107.2-201ENST00000445127 392 ntBASIC4.96□□□□□ -1.62
CISHQ9NSE2 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.96□□□□□ -1.62
CISHQ9NSE2 AC098799.3-201ENST00000506095 438 ntBASIC4.96□□□□□ -1.62
CISHQ9NSE2 AC138938.1-201ENST00000515431 782 ntBASIC4.96□□□□□ -1.62
CISHQ9NSE2 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.96□□□□□ -1.62
CISHQ9NSE2 OR8A2P-201ENST00000528631 952 ntBASIC4.96□□□□□ -1.62
CISHQ9NSE2 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.96□□□□□ -1.62
CISHQ9NSE2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.96□□□□□ -1.62
CISHQ9NSE2 AC079075.1-201ENST00000559543 878 ntBASIC4.96□□□□□ -1.62
CISHQ9NSE2 AC005520.3-201ENST00000602874 370 ntBASIC4.96□□□□□ -1.62
CISHQ9NSE2 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.96□□□□□ -1.62
CISHQ9NSE2 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.96□□□□□ -1.62
CISHQ9NSE2 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.96□□□□□ -1.62
CISHQ9NSE2 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CISHQ9NSE2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CISHQ9NSE2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CISHQ9NSE2 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 OR56B2P-201ENST00000317102 954 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 RNVU1-6-201ENST00000364688 164 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 Z98745.1-201ENST00000402553 494 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 RN7SKP106-201ENST00000410832 272 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CISHQ9NSE2 AL359265.2-201ENST00000434367 631 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 RPS26P2-201ENST00000440331 348 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 SBDSP1-204ENST00000453858 737 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 AC010326.1-201ENST00000462726 602 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 AL591473.1-201ENST00000464297 313 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 AC108751.2-201ENST00000469993 231 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 AC104763.1-201ENST00000475274 360 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 TRIM36-IT1-201ENST00000503723 881 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.95□□□□□ -1.62
CISHQ9NSE2 AC026782.2-201ENST00000510845 636 ntBASIC4.95□□□□□ -1.62
CISHQ9NSE2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms