Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 C1GALT1P3-201ENST00000522049 819 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 TOMM20P2-201ENST00000540082 421 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 AC092490.3-201ENST00000545370 572 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 AL110118.1-201ENST00000553543 400 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 BLZF2P-201ENST00000553776 1130 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 RBM22P1-201ENST00000578589 1214 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 AC068790.4-201ENST00000602474 263 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM4Q9C037 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM4Q9C037 MTCO1P1-201ENST00000624263 1081 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 AP003400.3-201ENST00000624904 346 ntBASIC5.07□□□□□ -1.6
TRIM4Q9C037 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM4Q9C037 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM4Q9C037 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM4Q9C037 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.07□□□□□ -1.6
TRIM4Q9C037 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
TRIM4Q9C037 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM4Q9C037 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 OR10J6P-201ENST00000289731 930 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 RN7SKP104-201ENST00000362605 328 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 RNA5SP339-201ENST00000390987 122 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 ATP5F1P2-201ENST00000398143 760 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 PRUNEP1-201ENST00000425846 705 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 AC124944.2-201ENST00000429866 1242 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 BTF3P6-201ENST00000448054 499 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 MTND6P2-201ENST00000512226 524 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 OR5AN2P-201ENST00000534535 896 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 RN7SL356P-201ENST00000582228 248 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 AC234771.5-201ENST00000600161 514 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 AC005084.1-201ENST00000605160 304 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 BX005214.3-202ENST00000619809 325 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 CYP4F35P-202ENST00000636121 390 ntBASIC5.06□□□□□ -1.6
TRIM4Q9C037 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM4Q9C037 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM4Q9C037 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM4Q9C037 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM4Q9C037 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
TRIM4Q9C037 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM4Q9C037 AC063976.2-201ENST00000425667 3556 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM4Q9C037 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM4Q9C037 AC092435.4-201ENST00000623012 4159 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM4Q9C037 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM4Q9C037 IL6STP1-201ENST00000346911 1020 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM4Q9C037 RNU6-398P-201ENST00000384143 109 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 CHMP1B2P-201ENST00000399581 597 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 OR4K12P-201ENST00000406538 961 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 DNAJC19P7-201ENST00000428811 344 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 RPS26P4-201ENST00000431743 355 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 RPL12P17-201ENST00000432393 498 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 AC011753.3-201ENST00000443436 406 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM4Q9C037 RPS12P31-201ENST00000491419 398 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 HMGB3P13-201ENST00000511263 607 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 RNU6-941P-201ENST00000516346 108 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 AC078878.1-201ENST00000539832 958 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 AL137072.1-201ENST00000603444 466 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 MIR6839-201ENST00000620425 113 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM4Q9C037 DDX18P3-201ENST00000404856 2007 ntBASIC5.05□□□□□ -1.6
TRIM4Q9C037 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM4Q9C037 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
TRIM4Q9C037 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.04□□□□□ -1.6
TRIM4Q9C037 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms