Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AC245389.1-201ENST00000605141 529 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 AL133243.1-201ENST00000614487 366 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 OR8B1P-202ENST00000641132 1178 ntBASIC7.18□□□□□ -1.26
SCAPERQ9BY12 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC7.18□□□□□ -1.26
SCAPERQ9BY12 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 ZNF137P-201ENST00000456718 1920 ntBASIC7.17□□□□□ -1.26
SCAPERQ9BY12 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 NDUFA5P1-201ENST00000433858 341 ntBASIC7.17□□□□□ -1.26
SCAPERQ9BY12 NUTF2P3-201ENST00000448540 384 ntBASIC7.17□□□□□ -1.26
SCAPERQ9BY12 RPL21P126-201ENST00000470049 478 ntBASIC7.17□□□□□ -1.26
SCAPERQ9BY12 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 AC040958.1-201ENST00000561102 201 ntBASIC7.17□□□□□ -1.26
SCAPERQ9BY12 AC007342.4-202ENST00000565189 721 ntTSL 3 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.17□□□□□ -1.26
SCAPERQ9BY12 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 ZFRP1-201ENST00000457579 2970 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 ABCC13-202ENST00000463099 3842 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC025031.4-201ENST00000621248 3271 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AL445189.1-201ENST00000405722 338 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 SLC4A1APP1-201ENST00000419995 602 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC114755.5-201ENST00000447760 831 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 CARD16-203ENST00000525374 503 ntTSL 3 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC093249.4-201ENST00000564755 259 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC090948.2-201ENST00000607363 564 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC023043.4-201ENST00000612081 449 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AL023881.1-201ENST00000621088 301 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 U3.53-201ENST00000628922 216 ntBASIC7.16□□□□□ -1.26
SCAPERQ9BY12 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
SCAPERQ9BY12 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SCAPERQ9BY12 ACTR3BP2-202ENST00000623630 1338 ntBASIC7.15□□□□□ -1.26
SCAPERQ9BY12 STX3-208ENST00000641815 3236 ntBASIC7.15□□□□□ -1.26
SCAPERQ9BY12 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC7.15□□□□□ -1.26
SCAPERQ9BY12 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SCAPERQ9BY12 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCAPERQ9BY12 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
SCAPERQ9BY12 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
SCAPERQ9BY12 BCORP1-203ENST00000513194 5093 ntBASIC7.15□□□□□ -1.26
SCAPERQ9BY12 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 RN7SKP186-201ENST00000365371 303 ntBASIC7.15□□□□□ -1.27
SCAPERQ9BY12 RPS29P17-201ENST00000430795 166 ntBASIC7.15□□□□□ -1.27
SCAPERQ9BY12 RPL34P6-201ENST00000432390 345 ntBASIC7.15□□□□□ -1.27
SCAPERQ9BY12 NPM1P28-201ENST00000492269 840 ntBASIC7.15□□□□□ -1.27
SCAPERQ9BY12 AC016559.2-201ENST00000510759 359 ntBASIC7.15□□□□□ -1.27
SCAPERQ9BY12 RNU4ATAC18P-201ENST00000516179 126 ntBASIC7.15□□□□□ -1.27
SCAPERQ9BY12 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 AC090286.3-201ENST00000573133 187 ntBASIC7.15□□□□□ -1.27
SCAPERQ9BY12 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 AC034229.5-201ENST00000624258 185 ntBASIC7.15□□□□□ -1.27
SCAPERQ9BY12 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
SCAPERQ9BY12 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
SCAPERQ9BY12 AL137058.3-201ENST00000624531 3099 ntBASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms