Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 IKZF3-203ENST00000346872 9667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LYSTQ99698 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LYSTQ99698 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
LYSTQ99698 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.17□□□□□ -1.9
LYSTQ99698 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LYSTQ99698 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.17□□□□□ -1.9
LYSTQ99698 AC017019.1-201ENST00000426129 261 ntBASIC3.17□□□□□ -1.9
LYSTQ99698 AL050321.1-201ENST00000432363 400 ntBASIC3.17□□□□□ -1.9
LYSTQ99698 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC3.17□□□□□ -1.9
LYSTQ99698 AC016559.2-201ENST00000510759 359 ntBASIC3.17□□□□□ -1.9
LYSTQ99698 AC027667.1-201ENST00000545814 304 ntBASIC3.17□□□□□ -1.9
LYSTQ99698 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
LYSTQ99698 AL133243.1-201ENST00000614487 366 ntBASIC3.17□□□□□ -1.9
LYSTQ99698 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
LYSTQ99698 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
LYSTQ99698 AL359195.2-201ENST00000623657 4412 ntBASIC3.17□□□□□ -1.9
LYSTQ99698 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.17□□□□□ -1.9
LYSTQ99698 MITF-203ENST00000328528 4680 ntTSL 5 BASIC3.17□□□□□ -1.9
LYSTQ99698 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC3.17□□□□□ -1.9
LYSTQ99698 AL355488.2-201ENST00000609909 2850 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 NOX4-214ENST00000532825 2039 ntTSL 2 BASIC3.16□□□□□ -1.9
LYSTQ99698 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LYSTQ99698 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LYSTQ99698 RNA5SP223-201ENST00000365174 120 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AC007618.1-201ENST00000366455 732 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 UQCRBP1-201ENST00000421129 336 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.16□□□□□ -1.9
LYSTQ99698 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.16□□□□□ -1.9
LYSTQ99698 GMPSP1-201ENST00000514075 579 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.16□□□□□ -1.9
LYSTQ99698 AC006116.5-201ENST00000591936 559 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AC025857.2-201ENST00000602711 238 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 RNU4-89P-201ENST00000607443 133 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 U3.53-201ENST00000628922 216 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
LYSTQ99698 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
LYSTQ99698 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.16□□□□□ -1.9
LYSTQ99698 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC3.16□□□□□ -1.9
LYSTQ99698 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LYSTQ99698 VN1R37P-201ENST00000419096 748 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AC091564.1-201ENST00000464563 479 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 UBE2DNL-203ENST00000474922 222 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.16□□□□□ -1.9
LYSTQ99698 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC3.16□□□□□ -1.9
LYSTQ99698 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.16□□□□□ -1.9
LYSTQ99698 AC090181.2-201ENST00000602975 672 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC3.16□□□□□ -1.9
LYSTQ99698 FAM27B-201ENST00000610601 213 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AL356863.1-201ENST00000623378 1080 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
LYSTQ99698 AC007382.1-201ENST00000624376 2618 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.16□□□□□ -1.9
LYSTQ99698 SPTA1-201ENST00000368147 7999 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 MGAT5-201ENST00000281923 8144 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 RNA5SP453-201ENST00000362503 119 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AC096664.2-201ENST00000411843 406 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 RPL12P9-201ENST00000412942 488 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 RPL5P32-201ENST00000454085 879 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 AC010460.1-201ENST00000507087 466 ntBASIC3.16□□□□□ -1.9
LYSTQ99698 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LYSTQ99698 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC3.16□□□□□ -1.9
LYSTQ99698 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC3.16□□□□□ -1.9
LYSTQ99698 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LYSTQ99698 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC3.16□□□□□ -1.9
LYSTQ99698 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.16□□□□□ -1.9
LYSTQ99698 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
LYSTQ99698 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC3.16□□□□□ -1.9
LYSTQ99698 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
LYSTQ99698 MFSD8-236ENST00000641509 4050 ntBASIC3.15□□□□□ -1.9
LYSTQ99698 ITK-201ENST00000422843 4528 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LYSTQ99698 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC3.15□□□□□ -1.9
LYSTQ99698 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC3.15□□□□□ -1.9
LYSTQ99698 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.9
LYSTQ99698 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LYSTQ99698 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
LYSTQ99698 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.15□□□□□ -1.9
LYSTQ99698 AL445584.1-201ENST00000431451 330 ntBASIC3.15□□□□□ -1.9
LYSTQ99698 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC3.15□□□□□ -1.9
LYSTQ99698 RN7SL517P-201ENST00000462240 305 ntBASIC3.15□□□□□ -1.9
LYSTQ99698 AC090515.3-201ENST00000560431 315 ntBASIC3.15□□□□□ -1.9
LYSTQ99698 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.15□□□□□ -1.9
LYSTQ99698 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
LYSTQ99698 RAPGEF5-212ENST00000620335 5506 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
LYSTQ99698 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.15□□□□□ -1.9
LYSTQ99698 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms