Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 Z82195.1-201ENST00000604558 398 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC017104.5-201ENST00000637647 639 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 AC087565.3-203ENST00000641018 837 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
VPS50Q96JG6 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.51□□□□□ -1.53
VPS50Q96JG6 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 AL360270.2-201ENST00000562952 5985 ntBASIC5.51□□□□□ -1.53
VPS50Q96JG6 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC011755.1-201ENST00000623763 2049 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 RPL5P19-201ENST00000404228 893 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 NPM1P40-201ENST00000412758 733 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 HIGD1AP15-201ENST00000416198 280 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC005005.2-201ENST00000420779 380 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 CHEK2P5-201ENST00000423877 246 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC093084.1-201ENST00000424233 687 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC092648.1-201ENST00000425870 423 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AL121776.1-201ENST00000429337 372 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AL358794.1-201ENST00000445689 381 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 RPL36AP39-201ENST00000445859 318 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 MTATP6P26-201ENST00000445926 662 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 HSPE1P22-201ENST00000456856 327 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 RPS20P4-201ENST00000461659 355 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 BOLA3P3-201ENST00000505182 232 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 ENPP7P11-201ENST00000505915 627 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 SCARNA21.2-201ENST00000516600 166 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC023538.1-201ENST00000534576 736 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AL121594.2-201ENST00000541658 472 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC007225.2-201ENST00000562529 256 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC022022.2-201ENST00000602989 360 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC019131.2-201ENST00000609071 870 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AP000894.4-201ENST00000610185 483 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AP002791.1-201ENST00000623291 381 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC120349.3-201ENST00000624377 529 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AL049767.1-202ENST00000637826 242 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 AC091305.2-201ENST00000624049 1576 ntBASIC5.5□□□□□ -1.53
VPS50Q96JG6 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
VPS50Q96JG6 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
VPS50Q96JG6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC003973.3-201ENST00000624863 2822 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 RNA5SP46-201ENST00000362370 120 ntBASIC5.49□□□□□ -1.53
VPS50Q96JG6 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC5.49□□□□□ -1.53
VPS50Q96JG6 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 403.1 ms