Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 MIR4472-2-201ENST00000582069 67 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 ELOCP34-201ENST00000604436 327 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 KATNBL1P1-201ENST00000605192 748 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 AL512329.2-201ENST00000607350 548 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC011472.4-201ENST00000615848 491 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
PDLIM5Q96HC4 AC000374.1-201ENST00000434698 1745 ntBASIC5□□□□□ -1.61
PDLIM5Q96HC4 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
PDLIM5Q96HC4 AL450345.1-202ENST00000605741 3881 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 DDX6P1-205ENST00000441966 1436 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 RN7SKP224-201ENST00000364140 325 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 RNU1-43P-201ENST00000365052 165 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 DUTP5-201ENST00000406790 469 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 DPY19L1P2-201ENST00000426647 915 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 BTF3P6-201ENST00000448054 499 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 TPT1P1-201ENST00000458495 518 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 RNU6-1218P-201ENST00000458990 108 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 PPIAP21-201ENST00000464473 501 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AC009127.1-201ENST00000467090 155 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 ATP5LP3-201ENST00000514223 304 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 HMGB1P46-201ENST00000520062 610 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AGGF1P9-201ENST00000561884 913 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 MIR3176-201ENST00000582210 90 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 PSMA6P4-201ENST00000603247 718 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AC099494.2-201ENST00000623371 978 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AL138820.1-201ENST00000617901 5305 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AL451142.2-201ENST00000429076 2090 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 AC100778.3-201ENST00000580060 1750 ntBASIC4.99□□□□□ -1.61
PDLIM5Q96HC4 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 RN7SKP74-201ENST00000362849 309 ntBASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 RNU6-883P-201ENST00000384597 107 ntBASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 RN7SKP114-201ENST00000410327 279 ntBASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 AC105402.1-201ENST00000413336 545 ntBASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 NANOGP4-201ENST00000427230 913 ntBASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 AC012497.1-201ENST00000429392 575 ntBASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 RPS26P4-201ENST00000431743 355 ntBASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 AL450023.3-201ENST00000440592 271 ntBASIC4.98□□□□□ -1.61
PDLIM5Q96HC4 GTF3AP5-201ENST00000442645 697 ntBASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms