Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 MIR3176-201ENST00000582210 90 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 UBA2-208ENST00000592791 910 ntTSL 2 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC010245.2-201ENST00000606908 1167 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC025574.2-201ENST00000615621 514 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 MIR8080-201ENST00000622224 89 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC015660.5-201ENST00000623238 564 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AC083865.1-201ENST00000636634 831 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AL590396.4-201ENST00000636779 956 ntBASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CHMP4CQ96CF2 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 ATP5A1P1-201ENST00000454088 1321 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 RNU5B-4P-201ENST00000363508 111 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 SNORA70.6-201ENST00000383934 134 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 RPL7L1P9-201ENST00000431298 745 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 RPS7P2-201ENST00000435134 607 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 OR6D1P-201ENST00000436165 939 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 MED6P1-201ENST00000439659 713 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 YWHAZP2-201ENST00000440317 728 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC004854.1-201ENST00000440356 349 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC016772.1-201ENST00000444170 1261 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 MED28P3-201ENST00000444288 531 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 DUXAP8-207ENST00000456786 622 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 RN7SL583P-201ENST00000475692 287 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 UBE2V1P12-201ENST00000503954 474 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC091912.1-201ENST00000511351 248 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 SEPT10P1-201ENST00000517342 1162 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC118942.1-201ENST00000529674 1035 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AL049830.4-201ENST00000555149 351 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC069431.2-201ENST00000604149 1099 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC099785.1-201ENST00000605697 437 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 DUXAP10-204ENST00000612052 616 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AL356274.1-201ENST00000617064 410 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 MIR6719-201ENST00000622428 87 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 C4BPAP1-201ENST00000415474 1893 ntBASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CHMP4CQ96CF2 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC006206.1-201ENST00000544842 3387 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 PROS2P-201ENST00000474651 1951 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 RNU6-666P-201ENST00000363499 107 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 RN7SKP6-201ENST00000364795 319 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 SNORD56.6-201ENST00000384569 71 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AL136131.1-201ENST00000406079 803 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 RPL12P17-201ENST00000432393 498 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 CACYBPP1-201ENST00000438592 684 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC097499.1-201ENST00000444277 208 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 AC092685.1-201ENST00000447960 1243 ntBASIC6.5□□□□□ -1.37
CHMP4CQ96CF2 RPL7P61-201ENST00000451721 751 ntBASIC6.5□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms