Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 ECM1P2-201ENST00000503354 1577 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 RNA5SP455-201ENST00000365190 119 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AL359643.1-201ENST00000404109 423 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 MIR1271-201ENST00000408537 86 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AL353597.2-202ENST00000434901 373 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 EIF4A1P11-201ENST00000451239 222 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AC113430.1-201ENST00000506872 718 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 RNA5SP43-201ENST00000516559 110 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 RN7SKP260-201ENST00000516907 149 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AC026688.1-201ENST00000520639 1168 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AC012146.2-201ENST00000576545 416 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 RN7SL435P-201ENST00000584418 282 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 LINC00901.1-201ENST00000617252 152 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 AC015871.5-202ENST00000623252 701 ntBASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 FGG-205ENST00000407946 1636 ntTSL 5 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.71□□□□□ -1.66
CLHC1Q8NHS4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AC015813.6-201ENST00000624409 5808 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 SNURFL-201ENST00000309296 343 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AC011155.1-201ENST00000316512 456 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 RN7SKP269-201ENST00000365545 319 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AL357515.1-201ENST00000402967 542 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 BMS1P13-201ENST00000417301 885 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 RGS17P1-201ENST00000423358 553 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AC012519.1-201ENST00000424588 610 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AC022022.1-201ENST00000430304 178 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AL163193.1-201ENST00000444895 788 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 RHEBP2-201ENST00000450289 600 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AL389915.2-201ENST00000454576 441 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 RPL7L1P4-201ENST00000513004 707 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 ATP5LP3-201ENST00000514223 304 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 RNA5SP360-201ENST00000516555 118 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 IGHVII-44-2-201ENST00000517728 250 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 NMNAT1P1-201ENST00000554095 876 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AC011445.2-201ENST00000599274 173 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AL627230.1-201ENST00000613077 211 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 AL591926.8-201ENST00000616876 211 ntBASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CLHC1Q8NHS4 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 RNU6-171P-201ENST00000384354 107 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AL391361.1-201ENST00000405580 489 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 TMBIM7P-201ENST00000418074 855 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AF186996.5-201ENST00000418098 904 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC099336.2-201ENST00000422457 254 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 CKS1BP6-201ENST00000424932 240 ntBASIC4.69□□□□□ -1.66
CLHC1Q8NHS4 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms