Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AL354714.3-201ENST00000447284 493 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 MEMO1P4-201ENST00000453590 386 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 GTF2F2P1-201ENST00000511083 675 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC098976.1-201ENST00000513014 541 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC092653.1-201ENST00000608509 531 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC073575.2-201ENST00000614212 627 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC005858.4-201ENST00000623191 700 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AL731532.2-201ENST00000623542 1953 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 OR6C69P-201ENST00000394268 893 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AL049697.2-201ENST00000403708 294 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC108751.3-201ENST00000461814 1020 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 RN7SL189P-201ENST00000468631 289 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 RPL7P19-201ENST00000469948 618 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC011005.3-201ENST00000491624 395 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 PPM1AP1-201ENST00000502740 1135 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC026726.1-201ENST00000512859 601 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC130364.2-201ENST00000528639 604 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 AC074101.1-201ENST00000637861 241 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 DNM1P47-203ENST00000571780 12667 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 NEAT1-202ENST00000501122 22743 ntBASIC1.49□□□□□ -2.17
SYNE1Q8NF91 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.49□□□□□ -2.17
SYNE1Q8NF91 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 HMGN2P27-201ENST00000427352 270 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 C4BPAP2-201ENST00000428434 478 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC124944.2-201ENST00000429866 1242 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RPL7AP61-201ENST00000443410 636 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC020779.1-201ENST00000478757 796 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 NIP7P2-201ENST00000485801 544 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RN7SL290P-201ENST00000578661 300 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC087821.1-201ENST00000623639 567 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ELOCP19-201ENST00000411919 318 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC017019.1-201ENST00000426129 261 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC099670.2-201ENST00000435130 321 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL138878.2-201ENST00000440581 1241 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL359073.1-201ENST00000448036 403 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC125494.2-201ENST00000602431 657 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC108359.1-201ENST00000616451 1211 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC007390.2-201ENST00000606229 3803 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RPL11P3-201ENST00000395256 523 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AC025750.1-201ENST00000399891 379 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SNORA77-201ENST00000408716 125 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RPS29P17-201ENST00000430795 166 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 RPS29P9-201ENST00000440360 171 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC1.48□□□□□ -2.17
SYNE1Q8NF91 AP005119.2-201ENST00000579735 1105 ntBASIC1.48□□□□□ -2.17
SYNE1Q8NF91 TCP11X1-202ENST00000622971 1372 ntBASIC1.48□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms