Protein–RNA interactions for Protein: Q7RTU4

BHLHA9, Class A basic helix-loop-helix protein 9, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHA9Q7RTU4 MTCO1P6-201ENST00000481192 1384 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC104446.1-201ENST00000613728 1321 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 RN7SKP104-201ENST00000362605 328 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 RNA5SP305-201ENST00000362665 119 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 RNU6-192P-201ENST00000391253 100 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AL121978.1-201ENST00000402778 359 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 RNU6ATAC7P-201ENST00000408111 127 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 RN7SKP16-201ENST00000410180 299 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 BRWD1P3-201ENST00000428816 390 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 DLGAP5P1-201ENST00000430307 464 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 GAPDHP58-201ENST00000438477 1006 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AL136455.1-201ENST00000441083 1240 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 MTCYBP3-201ENST00000445588 1137 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 PRPF38AP1-201ENST00000451976 933 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 MTND3P6-201ENST00000485242 339 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 RPL32P9-201ENST00000487963 407 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC021146.8-201ENST00000507455 733 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 MTND5P13-201ENST00000513046 1079 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC040958.1-201ENST00000561102 201 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC019322.1-201ENST00000571869 389 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC007448.1-201ENST00000582714 234 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC011492.1-201ENST00000600023 315 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC010620.1-201ENST00000601088 1102 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AL353600.1-201ENST00000608148 251 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC211433.2-201ENST00000608433 387 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC093799.2-201ENST00000610062 578 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AP005212.4-201ENST00000614206 710 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AC063952.1-203ENST00000634410 658 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 SMG1P7-201ENST00000565246 2704 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 Z95114.1-201ENST00000624264 14574 ntBASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
BHLHA9Q7RTU4 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC106754.1-201ENST00000562632 1513 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 NXF4-202ENST00000416098 1465 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 RNU4-4P-201ENST00000364588 130 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 RNU6-867P-201ENST00000364956 107 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 RNA5SP223-201ENST00000365174 120 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 U3.32-201ENST00000408116 212 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC009518.2-201ENST00000418056 731 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC106901.1-201ENST00000425086 698 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC074367.1-201ENST00000438685 1125 ntBASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.34□□□□□ -1.55
BHLHA9Q7RTU4 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms