Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC017035.1-201ENST00000411999 1115 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 CYCSP52-201ENST00000422857 310 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 Z83838.1-202ENST00000456225 839 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 CST12P-201ENST00000457644 362 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 H3F3AP5-201ENST00000475267 429 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC018645.1-201ENST00000505003 109 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 MTCO3P9-201ENST00000506989 781 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC002456.2-201ENST00000509356 380 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC023632.1-201ENST00000518463 375 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC084337.1-201ENST00000524809 686 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AL133399.1-201ENST00000527476 298 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC103968.1-201ENST00000557841 573 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC092718.4-201ENST00000566639 716 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 AP001267.4-201ENST00000602598 545 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AL049634.3-201ENST00000604968 457 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AL352984.2-201ENST00000611153 546 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 AC114546.4-201ENST00000624413 369 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 FAM157B-203ENST00000639350 358 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 GLYATL1P1-201ENST00000528297 1607 ntBASIC6.78□□□□□ -1.32
RNF43Q68DV7 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
RNF43Q68DV7 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.78□□□□□ -1.32
RNF43Q68DV7 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
RNF43Q68DV7 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.32
RNF43Q68DV7 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.77□□□□□ -1.32
RNF43Q68DV7 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 FAM32BP-201ENST00000344033 333 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 RNU1-84P-201ENST00000365447 164 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 Y_RNA.450-201ENST00000384198 113 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 Y_RNA.453-201ENST00000384223 109 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL079342.2-201ENST00000403367 482 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL590004.1-201ENST00000405321 300 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 RPS7P13-201ENST00000413955 498 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC007568.1-201ENST00000422912 471 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 RPL12P16-201ENST00000431098 498 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC005189.1-201ENST00000431286 310 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 RPS29P14-201ENST00000431518 171 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC008072.1-201ENST00000434254 824 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 GAPDHP59-201ENST00000435908 267 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC092427.1-201ENST00000439177 601 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL592437.1-201ENST00000443781 492 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 DPPA3P1-201ENST00000448050 469 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 RPS20P24-201ENST00000457473 361 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 RPL23AP64-201ENST00000469465 435 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 RPS3AP17-201ENST00000472594 777 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 MTND6P6-201ENST00000478031 263 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC109462.1-201ENST00000491087 368 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AL358832.1-201ENST00000497800 389 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC104109.1-201ENST00000498563 436 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 AK4P6-201ENST00000505168 528 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.77□□□□□ -1.33
RNF43Q68DV7 IGBP1P5-201ENST00000507524 1000 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
RNF43Q68DV7 MTCO1P35-201ENST00000515270 228 ntBASIC6.77□□□□□ -1.33
RNF43Q68DV7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 123.9 ms