Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 OR52A4P-201ENST00000472867 958 ntBASIC5.78□□□□□ -1.48
RFX7Q2KHR2 RN7SL481P-201ENST00000477764 299 ntBASIC5.78□□□□□ -1.48
RFX7Q2KHR2 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 MAL2-201ENST00000522112 573 ntTSL 4 BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 AC093249.4-201ENST00000564755 259 ntBASIC5.78□□□□□ -1.48
RFX7Q2KHR2 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 MAPK10-263ENST00000641052 4307 ntBASIC5.78□□□□□ -1.48
RFX7Q2KHR2 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
RFX7Q2KHR2 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 AL442639.1-201ENST00000625030 1899 ntBASIC5.77□□□□□ -1.49
RFX7Q2KHR2 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 E2F6P2-201ENST00000420708 748 ntBASIC5.77□□□□□ -1.49
RFX7Q2KHR2 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.77□□□□□ -1.49
RFX7Q2KHR2 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 FAM3C2-201ENST00000312214 681 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 MIR129-1-201ENST00000384972 72 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AL590762.2-201ENST00000395798 571 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 ELOCP19-201ENST00000411919 318 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 COX6CP17-201ENST00000421389 185 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 VDAC1P6-201ENST00000430062 855 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC093720.1-201ENST00000505681 714 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 FKBP1BP1-201ENST00000553366 325 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC073091.2-201ENST00000603205 907 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 FAM27B-201ENST00000610601 213 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 MIR8069-1-201ENST00000616627 86 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 MIR8069-2-201ENST00000621412 86 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC021106.3-201ENST00000623925 531 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC011815.3-201ENST00000624194 473 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC008079.2-201ENST00000623543 20396 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AL031119.1-201ENST00000404707 1879 ntBASIC5.76□□□□□ -1.49
RFX7Q2KHR2 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RFX7Q2KHR2 AC010266.2-201ENST00000564741 3255 ntBASIC5.75□□□□□ -1.49
RFX7Q2KHR2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
RFX7Q2KHR2 AC068870.3-201ENST00000625077 2536 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms