Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 AC015804.1-201ENST00000622935 435 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 AP001784.1-201ENST00000624107 428 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.31□□□□□ -1.72
FOXF1Q12946 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXF1Q12946 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXF1Q12946 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.31□□□□□ -1.72
FOXF1Q12946 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
FOXF1Q12946 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
FOXF1Q12946 AC021242.1-201ENST00000507315 2035 ntBASIC4.31□□□□□ -1.72
FOXF1Q12946 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXF1Q12946 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
FOXF1Q12946 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
FOXF1Q12946 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
FOXF1Q12946 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 AL121950.1-201ENST00000624993 2077 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.3□□□□□ -1.72
FOXF1Q12946 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
FOXF1Q12946 RNA5SP87-201ENST00000384155 118 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
FOXF1Q12946 ARL4AP5-201ENST00000404372 599 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXF1Q12946 GLUD1P9-201ENST00000420997 1173 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 FABP7P1-201ENST00000424004 391 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AC004938.1-201ENST00000438468 308 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AC105233.1-201ENST00000498840 781 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 AC073358.1-201ENST00000505671 684 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 BTG4P1-201ENST00000510421 183 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 RNU2-30P-201ENST00000516209 141 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 RN7SKP276-201ENST00000516242 268 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AC091042.1-201ENST00000579213 173 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 AL391358.1-201ENST00000605342 190 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 AC073137.1-201ENST00000605636 634 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXF1Q12946 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AC073869.7-201ENST00000640874 297 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AL445487.1-201ENST00000415694 1580 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
FOXF1Q12946 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.3□□□□□ -1.72
FOXF1Q12946 AC116158.1-201ENST00000560231 2129 ntBASIC4.3□□□□□ -1.72
FOXF1Q12946 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
FOXF1Q12946 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXF1Q12946 AL359922.3-201ENST00000624779 1670 ntBASIC4.29□□□□□ -1.72
FOXF1Q12946 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.29□□□□□ -1.72
FOXF1Q12946 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXF1Q12946 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXF1Q12946 RN7SKP103-201ENST00000363848 320 ntBASIC4.29□□□□□ -1.72
FOXF1Q12946 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
FOXF1Q12946 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXF1Q12946 AL590762.2-201ENST00000395798 571 ntBASIC4.29□□□□□ -1.72
FOXF1Q12946 AL591848.1-201ENST00000413092 322 ntBASIC4.29□□□□□ -1.72
FOXF1Q12946 BX510359.2-201ENST00000417920 305 ntBASIC4.29□□□□□ -1.72
FOXF1Q12946 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.29□□□□□ -1.72
FOXF1Q12946 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXF1Q12946 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXF1Q12946 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXF1Q12946 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXF1Q12946 IGLV2-34-201ENST00000490007 283 ntBASIC4.29□□□□□ -1.72
FOXF1Q12946 AC020890.1-201ENST00000491837 504 ntBASIC4.29□□□□□ -1.72
FOXF1Q12946 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.29□□□□□ -1.72
FOXF1Q12946 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXF1Q12946 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXF1Q12946 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXF1Q12946 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
FOXF1Q12946 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC4.29□□□□□ -1.72
FOXF1Q12946 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.29□□□□□ -1.72
FOXF1Q12946 MIR6853-201ENST00000619642 74 ntBASIC4.29□□□□□ -1.72
FOXF1Q12946 MIR6730-201ENST00000622213 67 ntBASIC4.29□□□□□ -1.72
FOXF1Q12946 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXF1Q12946 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXF1Q12946 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
FOXF1Q12946 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.29□□□□□ -1.72
FOXF1Q12946 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXF1Q12946 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXF1Q12946 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.28□□□□□ -1.72
FOXF1Q12946 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
FOXF1Q12946 OR5AQ1P-203ENST00000641818 1529 ntBASIC4.28□□□□□ -1.72
FOXF1Q12946 AL590240.1-201ENST00000334118 313 ntBASIC4.28□□□□□ -1.72
FOXF1Q12946 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
FOXF1Q12946 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
FOXF1Q12946 AL133270.1-201ENST00000402635 279 ntBASIC4.28□□□□□ -1.72
FOXF1Q12946 TRGV5P-201ENST00000419915 354 ntBASIC4.28□□□□□ -1.72
FOXF1Q12946 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.28□□□□□ -1.72
FOXF1Q12946 AC092447.2-201ENST00000435487 669 ntBASIC4.28□□□□□ -1.72
FOXF1Q12946 CYCSP11-201ENST00000436426 315 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms