Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AL035246.1-201ENST00000433554 1255 ntBASIC4.97□□□□□ -1.61
LTBQ06643 OR6D1P-201ENST00000436165 939 ntBASIC4.97□□□□□ -1.61
LTBQ06643 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC4.97□□□□□ -1.61
LTBQ06643 CNOT7P2-201ENST00000441051 832 ntBASIC4.97□□□□□ -1.61
LTBQ06643 CYCSP51-201ENST00000443545 318 ntBASIC4.97□□□□□ -1.61
LTBQ06643 Z80107.2-201ENST00000445127 392 ntBASIC4.97□□□□□ -1.61
LTBQ06643 AC009220.1-201ENST00000451614 275 ntBASIC4.97□□□□□ -1.61
LTBQ06643 HIGD1AP8-201ENST00000453927 274 ntBASIC4.97□□□□□ -1.61
LTBQ06643 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.97□□□□□ -1.61
LTBQ06643 RPL7AP6-201ENST00000477943 801 ntBASIC4.97□□□□□ -1.61
LTBQ06643 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.97□□□□□ -1.61
LTBQ06643 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.97□□□□□ -1.61
LTBQ06643 HMGB1P46-201ENST00000520062 610 ntBASIC4.97□□□□□ -1.61
LTBQ06643 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.97□□□□□ -1.61
LTBQ06643 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 AC135279.1-201ENST00000543493 504 ntBASIC4.97□□□□□ -1.61
LTBQ06643 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.97□□□□□ -1.61
LTBQ06643 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LTBQ06643 IGBP1P1-201ENST00000554337 1009 ntBASIC4.97□□□□□ -1.61
LTBQ06643 MRPS21P7-201ENST00000566937 238 ntBASIC4.97□□□□□ -1.61
LTBQ06643 AP005403.1-201ENST00000579720 229 ntBASIC4.97□□□□□ -1.61
LTBQ06643 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.97□□□□□ -1.61
LTBQ06643 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LTBQ06643 AC002069.2-201ENST00000603580 883 ntBASIC4.97□□□□□ -1.61
LTBQ06643 AL160237.3-201ENST00000604114 1013 ntBASIC4.97□□□□□ -1.61
LTBQ06643 AC064807.4-201ENST00000607201 407 ntBASIC4.97□□□□□ -1.61
LTBQ06643 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 AC010632.3-201ENST00000611377 369 ntBASIC4.97□□□□□ -1.61
LTBQ06643 RNU6-1192P-201ENST00000612197 107 ntBASIC4.97□□□□□ -1.61
LTBQ06643 RNU6-489P-201ENST00000618289 107 ntBASIC4.97□□□□□ -1.61
LTBQ06643 CU639417.4-201ENST00000623928 207 ntBASIC4.97□□□□□ -1.61
LTBQ06643 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.97□□□□□ -1.61
LTBQ06643 AC068137.4-201ENST00000638485 296 ntBASIC4.97□□□□□ -1.61
LTBQ06643 AC073869.8-201ENST00000641806 335 ntBASIC4.97□□□□□ -1.61
LTBQ06643 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 MAPK10-328ENST00000641553 4009 ntBASIC4.97□□□□□ -1.61
LTBQ06643 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.97□□□□□ -1.61
LTBQ06643 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.97□□□□□ -1.61
LTBQ06643 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.97□□□□□ -1.61
LTBQ06643 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.97□□□□□ -1.61
LTBQ06643 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
LTBQ06643 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
LTBQ06643 DDX18P6-201ENST00000450119 1997 ntBASIC4.96□□□□□ -1.61
LTBQ06643 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.61
LTBQ06643 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LTBQ06643 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
LTBQ06643 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.62
LTBQ06643 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 CR382285.2-201ENST00000624662 1495 ntBASIC4.96□□□□□ -1.62
LTBQ06643 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 AC100757.1-201ENST00000616872 1835 ntBASIC4.96□□□□□ -1.62
LTBQ06643 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LTBQ06643 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LTBQ06643 SNORD116-2-201ENST00000384274 95 ntBASIC4.96□□□□□ -1.62
LTBQ06643 SNORA16A-201ENST00000384342 137 ntBASIC4.96□□□□□ -1.62
LTBQ06643 SNORD116-6-201ENST00000384711 96 ntBASIC4.96□□□□□ -1.62
LTBQ06643 PPIAP9-201ENST00000403866 498 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AC016397.1-201ENST00000412463 242 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AL596448.1-201ENST00000415024 392 ntBASIC4.96□□□□□ -1.62
LTBQ06643 TRIM60P17-201ENST00000415181 719 ntBASIC4.96□□□□□ -1.62
LTBQ06643 BX664727.1-201ENST00000416024 466 ntBASIC4.96□□□□□ -1.62
LTBQ06643 OR2X1P-201ENST00000421144 687 ntBASIC4.96□□□□□ -1.62
LTBQ06643 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.96□□□□□ -1.62
LTBQ06643 FO393414.1-201ENST00000428697 1184 ntBASIC4.96□□□□□ -1.62
LTBQ06643 RPL7P34-201ENST00000433316 712 ntBASIC4.96□□□□□ -1.62
LTBQ06643 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBQ06643 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.96□□□□□ -1.62
LTBQ06643 ARL5AP3-201ENST00000439327 386 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AC019185.1-201ENST00000442718 389 ntBASIC4.96□□□□□ -1.62
LTBQ06643 CEACAMP7-201ENST00000444105 496 ntBASIC4.96□□□□□ -1.62
LTBQ06643 RPL7P33-201ENST00000444159 742 ntBASIC4.96□□□□□ -1.62
LTBQ06643 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LTBQ06643 RPL31P20-201ENST00000449593 360 ntBASIC4.96□□□□□ -1.62
LTBQ06643 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 SNORD11.1-201ENST00000459482 85 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AC006463.2-201ENST00000473326 348 ntBASIC4.96□□□□□ -1.62
LTBQ06643 RN7SL547P-201ENST00000490793 290 ntBASIC4.96□□□□□ -1.62
LTBQ06643 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.96□□□□□ -1.62
LTBQ06643 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.96□□□□□ -1.62
LTBQ06643 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.96□□□□□ -1.62
LTBQ06643 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBQ06643 AC087894.1-201ENST00000538359 518 ntBASIC4.96□□□□□ -1.62
LTBQ06643 NOP56P3-201ENST00000549457 385 ntBASIC4.96□□□□□ -1.62
LTBQ06643 OR11H3P-201ENST00000554547 982 ntBASIC4.96□□□□□ -1.62
LTBQ06643 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBQ06643 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
LTBQ06643 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBQ06643 AC023824.3-201ENST00000569003 562 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBQ06643 MIR4697-201ENST00000582977 78 ntBASIC4.96□□□□□ -1.62
LTBQ06643 AC245036.5-201ENST00000596330 847 ntBASIC4.96□□□□□ -1.62
LTBQ06643 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LTBQ06643 AP000769.2-201ENST00000602344 396 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms