Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 RNA5SP397-201ENST00000391323 118 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 VTI1BP4-201ENST00000427516 527 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 RPL23AP1-201ENST00000428990 471 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 AL451139.1-201ENST00000434718 346 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 CYCSP24-201ENST00000445119 316 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.62□□□□□ -1.51
GABPAQ06546 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.62□□□□□ -1.51
GABPAQ06546 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.62□□□□□ -1.51
GABPAQ06546 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 AP001960.1-201ENST00000506494 658 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC5.62□□□□□ -1.51
GABPAQ06546 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.62□□□□□ -1.51
GABPAQ06546 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GABPAQ06546 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.62□□□□□ -1.51
GABPAQ06546 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.62□□□□□ -1.51
GABPAQ06546 AC019193.2-201ENST00000610012 634 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 AP000648.2-201ENST00000624182 404 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 FRG1EP-201ENST00000634469 770 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
GABPAQ06546 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
GABPAQ06546 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.62□□□□□ -1.51
GABPAQ06546 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
GABPAQ06546 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GABPAQ06546 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GABPAQ06546 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.62□□□□□ -1.51
GABPAQ06546 AL442128.2-201ENST00000620246 1824 ntBASIC5.62□□□□□ -1.51
GABPAQ06546 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.62□□□□□ -1.51
GABPAQ06546 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.62□□□□□ -1.51
GABPAQ06546 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
GABPAQ06546 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
GABPAQ06546 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GABPAQ06546 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GABPAQ06546 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
GABPAQ06546 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GABPAQ06546 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
GABPAQ06546 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GABPAQ06546 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.61□□□□□ -1.51
GABPAQ06546 RNU1-82P-201ENST00000390851 165 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
GABPAQ06546 AL590762.2-201ENST00000395798 571 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
GABPAQ06546 AC016397.1-201ENST00000412463 242 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 AC013429.2-201ENST00000418798 781 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
GABPAQ06546 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC5.61□□□□□ -1.51
GABPAQ06546 AC079168.2-201ENST00000453977 416 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 AC113398.2-201ENST00000507630 558 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC5.61□□□□□ -1.51
GABPAQ06546 RAB9BP1-201ENST00000519581 626 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 HNRNPRP2-201ENST00000528421 743 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.61□□□□□ -1.51
GABPAQ06546 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.61□□□□□ -1.51
GABPAQ06546 AL049830.4-201ENST00000555149 351 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.61□□□□□ -1.51
GABPAQ06546 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.61□□□□□ -1.51
GABPAQ06546 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.61□□□□□ -1.51
GABPAQ06546 AC125494.2-201ENST00000602431 657 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.61□□□□□ -1.51
GABPAQ06546 RBPJP2-201ENST00000618187 1444 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.61□□□□□ -1.51
GABPAQ06546 AC002525.1-201ENST00000624392 1622 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 AC073869.10-201ENST00000642016 354 ntBASIC5.61□□□□□ -1.51
GABPAQ06546 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
GABPAQ06546 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
GABPAQ06546 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.61□□□□□ -1.51
GABPAQ06546 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC5.61□□□□□ -1.51
GABPAQ06546 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.6□□□□□ -1.51
GABPAQ06546 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.6□□□□□ -1.51
GABPAQ06546 AC025574.1-201ENST00000554784 1653 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.6□□□□□ -1.51
GABPAQ06546 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.6□□□□□ -1.51
GABPAQ06546 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.6□□□□□ -1.51
GABPAQ06546 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 SNORA5.1-201ENST00000384275 131 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 ARL4AP5-201ENST00000404372 599 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC5.6□□□□□ -1.51
GABPAQ06546 AC140479.3-201ENST00000418944 1126 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 VN1R37P-201ENST00000419096 748 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC5.6□□□□□ -1.51
GABPAQ06546 AC068287.1-201ENST00000430283 295 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 UBE2V2P1-201ENST00000434717 398 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC5.6□□□□□ -1.51
GABPAQ06546 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.6□□□□□ -1.51
GABPAQ06546 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
GABPAQ06546 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
GABPAQ06546 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.6□□□□□ -1.51
GABPAQ06546 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.6□□□□□ -1.51
GABPAQ06546 RNU6-1334P-201ENST00000516032 105 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 RN7SKP92-201ENST00000517266 244 ntBASIC5.6□□□□□ -1.51
GABPAQ06546 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.6□□□□□ -1.51
GABPAQ06546 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.6□□□□□ -1.51
GABPAQ06546 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
GABPAQ06546 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC5.6□□□□□ -1.51
GABPAQ06546 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC5.6□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms