Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 PYM1-205ENST00000547925 499 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 HMGB3P26-201ENST00000560051 582 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC055839.1-201ENST00000634467 498 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 ACTR3BP5-201ENST00000448440 1479 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC012020.1-201ENST00000624541 1728 ntBASIC3.78□□□□□ -1.8
HIST1H1AQ02539 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC3.78□□□□□ -1.8
HIST1H1AQ02539 MAPK10-304ENST00000641341 3984 ntBASIC3.78□□□□□ -1.81
HIST1H1AQ02539 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC3.78□□□□□ -1.81
HIST1H1AQ02539 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AL445487.1-201ENST00000415694 1580 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC108751.5-201ENST00000492880 1336 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 RN7SKP15-201ENST00000364742 309 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 RNA5SP372-201ENST00000390836 115 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 NUDT19P3-201ENST00000404698 555 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 ZSCAN12P1-201ENST00000406489 419 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 SSR1P1-201ENST00000407630 814 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 RN7SKP114-201ENST00000410327 279 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 NPM1P4-201ENST00000414095 812 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC009302.1-201ENST00000417147 390 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AL162388.1-201ENST00000450912 352 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 RPS26P39-201ENST00000469206 341 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 CCDC75P1-201ENST00000469247 791 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC010350.1-201ENST00000504908 231 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 VWA8P1-201ENST00000510889 176 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 HNRNPRP2-201ENST00000528421 743 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC011595.3-201ENST00000546699 632 ntTSL 3 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 DUX4L52-201ENST00000549363 777 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 RPL21P7-201ENST00000557463 483 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 RPSAP73-201ENST00000614820 330 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC090527.3-201ENST00000619041 548 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AC008115.4-201ENST00000619780 775 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 STK31-205ENST00000433467 3085 ntTSL 2 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 CR382285.2-201ENST00000624662 1495 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 AL359922.3-201ENST00000624779 1670 ntBASIC3.77□□□□□ -1.81
HIST1H1AQ02539 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
HIST1H1AQ02539 DHX9P1-201ENST00000436565 3076 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AC068446.1-201ENST00000556425 1549 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 AC074029.4-201ENST00000624796 1859 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
HIST1H1AQ02539 SNORA17.1-201ENST00000362945 126 ntBASIC3.76□□□□□ -1.81
HIST1H1AQ02539 SNORA73.1-201ENST00000363107 205 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms