Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AL133268.1-201ENST00000405676 1401 ntBASIC4.63□□□□□ -1.67
HMGCS1Q01581 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HMGCS1Q01581 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS1Q01581 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS1Q01581 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 RNU1-83P-201ENST00000363426 164 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AL359643.1-201ENST00000404109 423 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 ARL4AP5-201ENST00000404372 599 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AP002530.1-201ENST00000405705 684 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 SNORA81-201ENST00000408493 178 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 OR6C64P-201ENST00000419708 825 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 FABP7P2-201ENST00000429946 379 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS1Q01581 RPS17P8-201ENST00000434525 335 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AL451139.1-201ENST00000434718 346 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 MRPL48P1-201ENST00000445390 636 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 TDGF1P1-201ENST00000445734 527 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 OTX2P1-201ENST00000450956 354 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC002553.2-201ENST00000453217 340 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 CYCSP34-201ENST00000458172 304 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC108751.2-201ENST00000469993 231 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 FKBP1BP1-201ENST00000553366 325 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC051619.2-201ENST00000559063 397 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 AP002884.5-201ENST00000595053 1132 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC011453.2-201ENST00000603737 729 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AL121932.1-201ENST00000605542 214 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 EIF3FP1-201ENST00000613970 806 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AL513548.1-201ENST00000562904 1724 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC027228.2-201ENST00000567141 2154 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS1Q01581 ZNF652P1-201ENST00000442420 1309 ntBASIC4.62□□□□□ -1.67
HMGCS1Q01581 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS1Q01581 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS1Q01581 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
HMGCS1Q01581 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.62□□□□□ -1.67
HMGCS1Q01581 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS1Q01581 AL445487.1-201ENST00000415694 1580 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS1Q01581 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS1Q01581 TLK1P1-201ENST00000456760 2440 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 AC112255.1-201ENST00000624070 2493 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS1Q01581 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 AC244033.1-201ENST00000426826 870 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 RN7SL329P-201ENST00000467740 299 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 AC098583.1-201ENST00000480875 255 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 RN7SKP46-201ENST00000515942 234 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 MORF4L1P3-201ENST00000525966 950 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 RNF138P2-201ENST00000603490 592 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 IMMP1LP1-201ENST00000605170 488 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 AC015849.6-201ENST00000605454 474 ntBASIC4.61□□□□□ -1.67
HMGCS1Q01581 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS1Q01581 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS1Q01581 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
HMGCS1Q01581 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
HMGCS1Q01581 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
HMGCS1Q01581 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.6□□□□□ -1.67
HMGCS1Q01581 SNORA74A-201ENST00000364089 198 ntBASIC4.6□□□□□ -1.67
HMGCS1Q01581 VN1R37P-201ENST00000419096 748 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms