Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 SAMMSON-209ENST00000641222 1100 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC4P56524 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.52□□□□□ -1.53
HDAC4P56524 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
HDAC4P56524 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
HDAC4P56524 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC4P56524 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
HDAC4P56524 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC4P56524 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.52□□□□□ -1.53
HDAC4P56524 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.52□□□□□ -1.53
HDAC4P56524 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC4P56524 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
HDAC4P56524 NAP1L4P1-201ENST00000319092 1157 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 RN7SKP162-201ENST00000363605 345 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 RNU6-609P-201ENST00000365459 107 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 OR1L6-202ENST00000373684 1044 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 RNU1-149P-201ENST00000390870 161 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 SNORA48.4-201ENST00000391089 134 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 HSPA8P15-201ENST00000401676 786 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 RPL5P19-201ENST00000404228 893 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AL391361.1-201ENST00000405580 489 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AL136131.1-201ENST00000406079 803 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AL355143.1-201ENST00000407101 841 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 RN7SKP247-201ENST00000411094 308 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 RPL35AP24-201ENST00000413846 330 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.51□□□□□ -1.53
HDAC4P56524 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC4P56524 RPL7L1P9-201ENST00000431298 745 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AC092447.2-201ENST00000435487 669 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AC093716.1-201ENST00000435923 377 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 MTCYBP29-201ENST00000436327 1006 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.51□□□□□ -1.53
HDAC4P56524 UBA52P7-201ENST00000486088 380 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 RN7SL814P-201ENST00000487715 300 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AC021087.2-201ENST00000504656 1203 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 PGAM1P13-201ENST00000507497 754 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AP006245.2-201ENST00000522004 300 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AC018442.3-201ENST00000523025 183 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 OR8A2P-201ENST00000528631 952 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC4P56524 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC4P56524 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.51□□□□□ -1.53
HDAC4P56524 NOP56P3-201ENST00000549457 385 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC4P56524 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.51□□□□□ -1.53
HDAC4P56524 AC233266.2-201ENST00000567067 528 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 MIR4489-201ENST00000578869 62 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AC005242.1-201ENST00000585658 438 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
HDAC4P56524 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.51□□□□□ -1.53
HDAC4P56524 AC084373.1-201ENST00000603311 235 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AC015849.2-201ENST00000605738 409 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AC120053.1-201ENST00000607706 736 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 AL645927.2-201ENST00000618350 349 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 MIR6839-201ENST00000620425 113 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 MIR6719-201ENST00000622428 87 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC4P56524 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.51□□□□□ -1.53
HDAC4P56524 CYP4F35P-202ENST00000636121 390 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
HDAC4P56524 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
HDAC4P56524 UGT2B26P-201ENST00000508672 1613 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.51□□□□□ -1.53
HDAC4P56524 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.51□□□□□ -1.53
HDAC4P56524 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.51□□□□□ -1.53
HDAC4P56524 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.51□□□□□ -1.53
HDAC4P56524 AC097461.1-201ENST00000568928 2821 ntBASIC5.51□□□□□ -1.53
HDAC4P56524 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.5□□□□□ -1.53
HDAC4P56524 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC4P56524 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC4P56524 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC4P56524 STX3-208ENST00000641815 3236 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HDAC4P56524 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC4P56524 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
HDAC4P56524 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.5□□□□□ -1.53
HDAC4P56524 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC4P56524 U3.2-201ENST00000362981 210 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
HDAC4P56524 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
HDAC4P56524 MIR589-201ENST00000385238 99 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
HDAC4P56524 VDAC2P1-201ENST00000399358 958 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AL353692.2-201ENST00000407054 335 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 NPM1P40-201ENST00000412758 733 ntBASIC5.5□□□□□ -1.53
HDAC4P56524 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms