Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 OR8A2P-201ENST00000528631 952 ntBASIC4.8□□□□□ -1.64
CDH11P55287 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH11P55287 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.8□□□□□ -1.64
CDH11P55287 AL049779.2-201ENST00000553847 315 ntBASIC4.8□□□□□ -1.64
CDH11P55287 AC126365.2-201ENST00000580630 379 ntBASIC4.8□□□□□ -1.64
CDH11P55287 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
CDH11P55287 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC4.8□□□□□ -1.64
CDH11P55287 MIR4443-201ENST00000585052 53 ntBASIC4.8□□□□□ -1.64
CDH11P55287 AC133794.1-201ENST00000602731 914 ntBASIC4.8□□□□□ -1.64
CDH11P55287 AC211433.2-201ENST00000608433 387 ntBASIC4.8□□□□□ -1.64
CDH11P55287 AL049777.1-201ENST00000622740 518 ntBASIC4.8□□□□□ -1.64
CDH11P55287 OR5AC4P-202ENST00000642086 985 ntBASIC4.8□□□□□ -1.64
CDH11P55287 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH11P55287 AC100778.3-201ENST00000580060 1750 ntBASIC4.8□□□□□ -1.64
CDH11P55287 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
CDH11P55287 MTCO1P4-201ENST00000520516 1409 ntBASIC4.8□□□□□ -1.64
CDH11P55287 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CDH11P55287 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
CDH11P55287 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
CDH11P55287 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 AC023421.1-201ENST00000590535 1785 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AL590763.1-201ENST00000398297 1545 ntBASIC4.79□□□□□ -1.64
CDH11P55287 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
CDH11P55287 RNA5SP223-201ENST00000365174 120 ntBASIC4.79□□□□□ -1.64
CDH11P55287 ATP5F1P6-201ENST00000402768 767 ntBASIC4.79□□□□□ -1.64
CDH11P55287 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH11P55287 CTSL3P-202ENST00000412179 788 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 BTF3P9-201ENST00000418784 283 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 AC104333.2-201ENST00000422630 192 ntBASIC4.79□□□□□ -1.64
CDH11P55287 MTCO2P1-201ENST00000424648 477 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 AL672138.1-201ENST00000450604 1015 ntBASIC4.79□□□□□ -1.64
CDH11P55287 RPL7P45-201ENST00000455851 743 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AC098583.1-201ENST00000480875 255 ntBASIC4.79□□□□□ -1.64
CDH11P55287 RN7SL30P-201ENST00000488416 306 ntBASIC4.79□□□□□ -1.64
CDH11P55287 RN7SL447P-201ENST00000494711 245 ntBASIC4.79□□□□□ -1.64
CDH11P55287 HIGD1AP14-201ENST00000507617 282 ntBASIC4.79□□□□□ -1.64
CDH11P55287 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 SCARNA16.4-201ENST00000516956 187 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 AL391001.1-201ENST00000602747 715 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AP003117.1-201ENST00000602771 554 ntBASIC4.79□□□□□ -1.64
CDH11P55287 MTCO2P22-201ENST00000603246 681 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AC018645.2-201ENST00000609151 472 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AL391834.1-201ENST00000609609 560 ntBASIC4.79□□□□□ -1.64
CDH11P55287 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 AP000943.4-201ENST00000622912 357 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AC068880.4-201ENST00000623082 495 ntBASIC4.79□□□□□ -1.64
CDH11P55287 AC090617.9-201ENST00000623751 147 ntBASIC4.79□□□□□ -1.64
CDH11P55287 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.79□□□□□ -1.64
CDH11P55287 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.79□□□□□ -1.64
CDH11P55287 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.79□□□□□ -1.64
CDH11P55287 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CDH11P55287 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC4.78□□□□□ -1.64
CDH11P55287 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH11P55287 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH11P55287 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH11P55287 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CDH11P55287 AC235565.1-201ENST00000456962 1325 ntBASIC4.78□□□□□ -1.64
CDH11P55287 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH11P55287 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH11P55287 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CDH11P55287 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CDH11P55287 MIR105-2-201ENST00000385083 81 ntBASIC4.78□□□□□ -1.64
CDH11P55287 MIR589-201ENST00000385238 99 ntBASIC4.78□□□□□ -1.64
CDH11P55287 TRAV9-1-201ENST00000390431 338 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CDH11P55287 RNU4-34P-201ENST00000410431 124 ntBASIC4.78□□□□□ -1.64
CDH11P55287 AC007738.1-201ENST00000413892 348 ntBASIC4.78□□□□□ -1.64
CDH11P55287 AC092570.3-201ENST00000420113 693 ntBASIC4.78□□□□□ -1.64
CDH11P55287 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CDH11P55287 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.78□□□□□ -1.64
CDH11P55287 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.78□□□□□ -1.64
CDH11P55287 AL512661.1-201ENST00000434586 1253 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms