Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC084373.1-201ENST00000603311 235 ntBASIC5.3□□□□□ -1.56
LIMK1P53667 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.3□□□□□ -1.56
LIMK1P53667 OR5AC4P-202ENST00000642086 985 ntBASIC5.3□□□□□ -1.56
LIMK1P53667 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
LIMK1P53667 MAPK10-328ENST00000641553 4009 ntBASIC5.3□□□□□ -1.56
LIMK1P53667 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LIMK1P53667 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
LIMK1P53667 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
LIMK1P53667 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LIMK1P53667 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.3□□□□□ -1.56
LIMK1P53667 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LIMK1P53667 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LIMK1P53667 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
LIMK1P53667 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
LIMK1P53667 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LIMK1P53667 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.29□□□□□ -1.56
LIMK1P53667 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LIMK1P53667 AC022417.1-201ENST00000624768 1303 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LIMK1P53667 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.29□□□□□ -1.56
LIMK1P53667 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 RNU4-39P-201ENST00000362455 127 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.29□□□□□ -1.56
LIMK1P53667 MIR23A-201ENST00000385245 73 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 AC119751.6-201ENST00000416712 186 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 AC092570.3-201ENST00000420113 693 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.29□□□□□ -1.56
LIMK1P53667 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 GSTM5P1-201ENST00000434751 660 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.29□□□□□ -1.56
LIMK1P53667 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.29□□□□□ -1.56
LIMK1P53667 GAPDHP14-201ENST00000450472 937 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 EIF4A1P11-201ENST00000451239 222 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 CALM1P2-201ENST00000452941 448 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC5.29□□□□□ -1.56
LIMK1P53667 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.29□□□□□ -1.56
LIMK1P53667 RN7SL817P-201ENST00000480777 288 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC5.29□□□□□ -1.56
LIMK1P53667 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.29□□□□□ -1.56
LIMK1P53667 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.29□□□□□ -1.56
LIMK1P53667 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.29□□□□□ -1.56
LIMK1P53667 MTND6P2-201ENST00000512226 524 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.29□□□□□ -1.56
LIMK1P53667 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.29□□□□□ -1.56
LIMK1P53667 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.29□□□□□ -1.56
LIMK1P53667 AL359219.2-201ENST00000555184 348 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
LIMK1P53667 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 AC009852.2-201ENST00000567898 485 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 AC005341.1-201ENST00000571086 708 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 H3F3BP2-201ENST00000583907 357 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.29□□□□□ -1.56
LIMK1P53667 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.29□□□□□ -1.56
LIMK1P53667 AC009597.2-201ENST00000604659 592 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.29□□□□□ -1.56
LIMK1P53667 MIR6780A-201ENST00000615089 68 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 AC138965.3-201ENST00000623875 498 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LIMK1P53667 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.29□□□□□ -1.56
LIMK1P53667 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.29□□□□□ -1.56
LIMK1P53667 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
LIMK1P53667 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
LIMK1P53667 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
LIMK1P53667 AC090017.1-201ENST00000548612 1779 ntBASIC5.29□□□□□ -1.56
LIMK1P53667 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
LIMK1P53667 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
LIMK1P53667 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 AC079741.1-201ENST00000321498 212 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 RNA5SP223-201ENST00000365174 120 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.28□□□□□ -1.56
LIMK1P53667 MT-TP-201ENST00000387461 68 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.28□□□□□ -1.56
LIMK1P53667 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.28□□□□□ -1.56
LIMK1P53667 RPL6P29-201ENST00000414863 865 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC5.28□□□□□ -1.56
LIMK1P53667 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
LIMK1P53667 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK1P53667 RPS26P47-201ENST00000427219 348 ntBASIC5.28□□□□□ -1.56
LIMK1P53667 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC5.28□□□□□ -1.56
LIMK1P53667 MTND4LP14-201ENST00000429447 288 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms