Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCN3P51790 AC005021.1-201ENST00000608730 355 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.52□□□□□ -1.53
CLCN3P51790 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.52□□□□□ -1.53
CLCN3P51790 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
CLCN3P51790 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
CLCN3P51790 SMG1P7-201ENST00000565246 2704 ntBASIC5.52□□□□□ -1.53
CLCN3P51790 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
CLCN3P51790 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCN3P51790 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCN3P51790 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCN3P51790 AC099654.2-201ENST00000433031 1980 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCN3P51790 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCN3P51790 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCN3P51790 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCN3P51790 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCN3P51790 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCN3P51790 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCN3P51790 Y_RNA.625-201ENST00000411256 107 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCN3P51790 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCN3P51790 USP9YP9-201ENST00000429406 715 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 TXNP5-201ENST00000441043 315 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 AC245517.2-201ENST00000442890 346 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 CYCSP53-201ENST00000455540 265 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 CABYRP1-201ENST00000465493 1045 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 AC090602.1-201ENST00000469695 252 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 AC093663.2-201ENST00000484625 313 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCN3P51790 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CLCN3P51790 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCN3P51790 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCN3P51790 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCN3P51790 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.51□□□□□ -1.53
CLCN3P51790 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC5.51□□□□□ -1.53
CLCN3P51790 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CLCN3P51790 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCN3P51790 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCN3P51790 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLCN3P51790 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
CLCN3P51790 MIR4737-201ENST00000583979 81 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCN3P51790 AC087283.1-201ENST00000604029 1074 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCN3P51790 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCN3P51790 AL512506.1-201ENST00000613918 449 ntBASIC5.51□□□□□ -1.53
CLCN3P51790 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCN3P51790 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
CLCN3P51790 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.51□□□□□ -1.53
CLCN3P51790 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCN3P51790 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.51□□□□□ -1.53
CLCN3P51790 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CLCN3P51790 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.51□□□□□ -1.53
CLCN3P51790 SAMMSON-226ENST00000642089 1582 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCN3P51790 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
CLCN3P51790 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
CLCN3P51790 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 SNORA56-201ENST00000383966 129 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 U3.32-201ENST00000408116 212 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 AC004074.1-201ENST00000421810 1063 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 COX6CP13-201ENST00000428703 226 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 AC073508.1-201ENST00000428866 656 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCN3P51790 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCN3P51790 XKRY2-201ENST00000442362 1093 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCN3P51790 HMGB1P4-201ENST00000455362 567 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 GAPDHP56-201ENST00000506031 988 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC5.5□□□□□ -1.53
CLCN3P51790 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCN3P51790 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCN3P51790 RN7SKP34-201ENST00000516142 244 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.5□□□□□ -1.53
CLCN3P51790 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.5□□□□□ -1.53
CLCN3P51790 OR4R2P-201ENST00000530815 597 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 AC137768.1-201ENST00000549998 553 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 CKS1BP1-201ENST00000555221 240 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 MTCYBP13-201ENST00000578634 1093 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.5□□□□□ -1.53
CLCN3P51790 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.5□□□□□ -1.53
CLCN3P51790 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.5□□□□□ -1.53
CLCN3P51790 AL159169.2-201ENST00000610061 1269 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 CR589904.2-201ENST00000612533 440 ntBASIC5.5□□□□□ -1.53
CLCN3P51790 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCN3P51790 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CLCN3P51790 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.5□□□□□ -1.53
CLCN3P51790 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms