Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 NDUFB4P12-201ENST00000513465 390 ntBASIC8.24□□□□□ -1.09
SMARCA4P51532 RPL23AP53-201ENST00000521854 457 ntBASIC8.24□□□□□ -1.09
SMARCA4P51532 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC8.24□□□□□ -1.09
SMARCA4P51532 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SMARCA4P51532 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
SMARCA4P51532 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC8.24□□□□□ -1.09
SMARCA4P51532 ABCC13-202ENST00000463099 3842 ntBASIC8.24□□□□□ -1.09
SMARCA4P51532 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC8.24□□□□□ -1.09
SMARCA4P51532 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SMARCA4P51532 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC8.23□□□□□ -1.09
SMARCA4P51532 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SMARCA4P51532 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SMARCA4P51532 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SMARCA4P51532 OR13Z1P-201ENST00000416141 834 ntBASIC8.23□□□□□ -1.09
SMARCA4P51532 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC8.23□□□□□ -1.09
SMARCA4P51532 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC8.23□□□□□ -1.09
SMARCA4P51532 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC8.23□□□□□ -1.09
SMARCA4P51532 OR8R1P-201ENST00000543943 764 ntBASIC8.23□□□□□ -1.09
SMARCA4P51532 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC8.23□□□□□ -1.09
SMARCA4P51532 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC8.23□□□□□ -1.09
SMARCA4P51532 AC113403.1-201ENST00000604910 193 ntBASIC8.23□□□□□ -1.09
SMARCA4P51532 BX005214.3-202ENST00000619809 325 ntBASIC8.23□□□□□ -1.09
SMARCA4P51532 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
SMARCA4P51532 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
SMARCA4P51532 MED23-203ENST00000368058 4576 ntTSL 5 BASIC8.23□□□□□ -1.09
SMARCA4P51532 LINC00622-201ENST00000562811 1570 ntBASIC8.23□□□□□ -1.09
SMARCA4P51532 RPL21P67-201ENST00000402896 478 ntBASIC8.22□□□□□ -1.09
SMARCA4P51532 RPL23AP52-201ENST00000439311 478 ntBASIC8.22□□□□□ -1.09
SMARCA4P51532 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.22□□□□□ -1.09
SMARCA4P51532 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC8.22□□□□□ -1.09
SMARCA4P51532 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SMARCA4P51532 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC8.22□□□□□ -1.09
SMARCA4P51532 MTCO1P49-201ENST00000523429 802 ntBASIC8.22□□□□□ -1.09
SMARCA4P51532 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
SMARCA4P51532 MIR3158-1-201ENST00000583596 81 ntBASIC8.22□□□□□ -1.09
SMARCA4P51532 AC091979.2-201ENST00000607514 214 ntBASIC8.22□□□□□ -1.09
SMARCA4P51532 Z95327.3-201ENST00000610385 572 ntBASIC8.22□□□□□ -1.09
SMARCA4P51532 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC8.22□□□□□ -1.09
SMARCA4P51532 AL139254.3-201ENST00000641097 674 ntBASIC8.22□□□□□ -1.09
SMARCA4P51532 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SMARCA4P51532 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SMARCA4P51532 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
SMARCA4P51532 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC8.22□□□□□ -1.09
SMARCA4P51532 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SMARCA4P51532 AGO1-201ENST00000373204 13708 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
SMARCA4P51532 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
SMARCA4P51532 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.22□□□□□ -1.09
SMARCA4P51532 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC8.21□□□□□ -1.09
SMARCA4P51532 RNU1-132P-201ENST00000364300 164 ntBASIC8.21□□□□□ -1.09
SMARCA4P51532 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC8.21□□□□□ -1.09
SMARCA4P51532 RPL21P89-201ENST00000444021 467 ntBASIC8.21□□□□□ -1.09
SMARCA4P51532 SNORA67.7-201ENST00000516664 135 ntBASIC8.21□□□□□ -1.09
SMARCA4P51532 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC8.21□□□□□ -1.09
SMARCA4P51532 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC8.21□□□□□ -1.09
SMARCA4P51532 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC8.21□□□□□ -1.09
SMARCA4P51532 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC8.21□□□□□ -1.09
SMARCA4P51532 AC090181.2-201ENST00000602975 672 ntBASIC8.21□□□□□ -1.09
SMARCA4P51532 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
SMARCA4P51532 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
SMARCA4P51532 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
SMARCA4P51532 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC8.21□□□□□ -1.1
SMARCA4P51532 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.21□□□□□ -1.1
SMARCA4P51532 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SMARCA4P51532 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
SMARCA4P51532 RNA5SP453-201ENST00000362503 119 ntBASIC8.21□□□□□ -1.1
SMARCA4P51532 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC8.21□□□□□ -1.1
SMARCA4P51532 RCC2P2-201ENST00000422174 918 ntBASIC8.21□□□□□ -1.1
SMARCA4P51532 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC8.21□□□□□ -1.1
SMARCA4P51532 RPL35P6-201ENST00000490024 372 ntBASIC8.21□□□□□ -1.1
SMARCA4P51532 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC8.21□□□□□ -1.1
SMARCA4P51532 RNU1-45P-201ENST00000517191 141 ntBASIC8.21□□□□□ -1.1
SMARCA4P51532 AC005868.1-201ENST00000536421 331 ntBASIC8.21□□□□□ -1.1
SMARCA4P51532 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC8.21□□□□□ -1.1
SMARCA4P51532 IPO5P1-202ENST00000600039 287 ntBASIC8.21□□□□□ -1.1
SMARCA4P51532 AL034370.1-201ENST00000397254 1590 ntBASIC8.21□□□□□ -1.1
SMARCA4P51532 AC017104.4-201ENST00000636283 1592 ntBASIC8.21□□□□□ -1.1
SMARCA4P51532 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.1
SMARCA4P51532 MROH9-201ENST00000367758 2227 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.1
SMARCA4P51532 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
SMARCA4P51532 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SMARCA4P51532 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
SMARCA4P51532 AC108467.2-201ENST00000617640 1597 ntBASIC8.2□□□□□ -1.1
SMARCA4P51532 Z98745.1-201ENST00000402553 494 ntBASIC8.2□□□□□ -1.1
SMARCA4P51532 HYKK-202ENST00000408962 847 ntTSL 5 BASIC8.2□□□□□ -1.1
SMARCA4P51532 RPL23AP43-201ENST00000446445 471 ntBASIC8.2□□□□□ -1.1
SMARCA4P51532 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC8.2□□□□□ -1.1
SMARCA4P51532 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC8.2□□□□□ -1.1
SMARCA4P51532 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC8.2□□□□□ -1.1
SMARCA4P51532 HYKK-203ENST00000563233 734 ntTSL 2 BASIC8.2□□□□□ -1.1
SMARCA4P51532 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC8.2□□□□□ -1.1
SMARCA4P51532 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
SMARCA4P51532 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC8.2□□□□□ -1.1
SMARCA4P51532 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC8.2□□□□□ -1.1
SMARCA4P51532 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
SMARCA4P51532 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
SMARCA4P51532 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
SMARCA4P51532 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SMARCA4P51532 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
SMARCA4P51532 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC8.19□□□□□ -1.1
SMARCA4P51532 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms