Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SRP9P49458 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.33□□□□□ -1.72
SRP9P49458 NXF4-202ENST00000416098 1465 ntBASIC4.33□□□□□ -1.72
SRP9P49458 CR383656.5-201ENST00000547616 1340 ntBASIC4.33□□□□□ -1.72
SRP9P49458 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SRP9P49458 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SRP9P49458 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 SNORA2.3-201ENST00000383920 135 ntBASIC4.33□□□□□ -1.72
SRP9P49458 MIR765-201ENST00000390226 114 ntBASIC4.33□□□□□ -1.72
SRP9P49458 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.33□□□□□ -1.72
SRP9P49458 RN7SKP273-201ENST00000411392 314 ntBASIC4.33□□□□□ -1.72
SRP9P49458 GTF2IP2-201ENST00000424290 697 ntBASIC4.33□□□□□ -1.72
SRP9P49458 EIF4HP2-201ENST00000424380 563 ntBASIC4.33□□□□□ -1.72
SRP9P49458 IPMKP1-201ENST00000425988 855 ntBASIC4.33□□□□□ -1.72
SRP9P49458 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.33□□□□□ -1.72
SRP9P49458 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.33□□□□□ -1.72
SRP9P49458 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC4.33□□□□□ -1.72
SRP9P49458 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.33□□□□□ -1.72
SRP9P49458 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.33□□□□□ -1.72
SRP9P49458 AL354714.3-201ENST00000447284 493 ntBASIC4.33□□□□□ -1.72
SRP9P49458 NDUFA5P8-201ENST00000449019 346 ntBASIC4.33□□□□□ -1.72
SRP9P49458 AC110749.1-201ENST00000462007 357 ntBASIC4.33□□□□□ -1.72
SRP9P49458 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.33□□□□□ -1.72
SRP9P49458 RPSAP50-201ENST00000481955 852 ntBASIC4.33□□□□□ -1.72
SRP9P49458 AC093763.2-201ENST00000505334 1223 ntBASIC4.33□□□□□ -1.72
SRP9P49458 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.33□□□□□ -1.72
SRP9P49458 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SRP9P49458 HMGN2P6-201ENST00000551091 273 ntBASIC4.33□□□□□ -1.72
SRP9P49458 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC4.33□□□□□ -1.72
SRP9P49458 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 NMNAT1P1-201ENST00000554095 876 ntBASIC4.33□□□□□ -1.72
SRP9P49458 HMGB3P26-201ENST00000560051 582 ntBASIC4.33□□□□□ -1.72
SRP9P49458 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.33□□□□□ -1.72
SRP9P49458 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.33□□□□□ -1.72
SRP9P49458 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 AC006116.3-201ENST00000592968 361 ntBASIC4.33□□□□□ -1.72
SRP9P49458 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.33□□□□□ -1.72
SRP9P49458 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 OR7M1P-201ENST00000608946 533 ntBASIC4.33□□□□□ -1.72
SRP9P49458 EIF3FP1-201ENST00000613970 806 ntBASIC4.33□□□□□ -1.72
SRP9P49458 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
SRP9P49458 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.33□□□□□ -1.72
SRP9P49458 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
SRP9P49458 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
SRP9P49458 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
SRP9P49458 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.33□□□□□ -1.72
SRP9P49458 DDX18P4-201ENST00000511690 1966 ntBASIC4.33□□□□□ -1.72
SRP9P49458 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SRP9P49458 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.32□□□□□ -1.72
SRP9P49458 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SRP9P49458 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.32□□□□□ -1.72
SRP9P49458 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.32□□□□□ -1.72
SRP9P49458 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
SRP9P49458 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
SRP9P49458 NAMPTP1-201ENST00000440465 2514 ntBASIC4.32□□□□□ -1.72
SRP9P49458 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.32□□□□□ -1.72
SRP9P49458 SNURFL-201ENST00000309296 343 ntBASIC4.32□□□□□ -1.72
SRP9P49458 AC008549.2-201ENST00000333482 706 ntBASIC4.32□□□□□ -1.72
SRP9P49458 RNA5SP305-201ENST00000362665 119 ntBASIC4.32□□□□□ -1.72
SRP9P49458 U8.4-201ENST00000363626 134 ntBASIC4.32□□□□□ -1.72
SRP9P49458 SNORA66-201ENST00000384792 133 ntBASIC4.32□□□□□ -1.72
SRP9P49458 MIR105-2-201ENST00000385083 81 ntBASIC4.32□□□□□ -1.72
SRP9P49458 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.32□□□□□ -1.72
SRP9P49458 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.32□□□□□ -1.72
SRP9P49458 QRSL1P2-201ENST00000418582 964 ntBASIC4.32□□□□□ -1.72
SRP9P49458 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.32□□□□□ -1.72
SRP9P49458 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.32□□□□□ -1.72
SRP9P49458 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.32□□□□□ -1.72
SRP9P49458 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.32□□□□□ -1.72
SRP9P49458 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.32□□□□□ -1.72
SRP9P49458 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.32□□□□□ -1.72
SRP9P49458 AC092647.2-201ENST00000452998 253 ntBASIC4.32□□□□□ -1.72
SRP9P49458 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.32□□□□□ -1.72
SRP9P49458 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4.32□□□□□ -1.72
SRP9P49458 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.32□□□□□ -1.72
SRP9P49458 RN7SL727P-201ENST00000482164 296 ntBASIC4.32□□□□□ -1.72
SRP9P49458 HMGN2P25-201ENST00000486956 268 ntBASIC4.32□□□□□ -1.72
SRP9P49458 DEFB109F-201ENST00000491870 277 ntBASIC4.32□□□□□ -1.72
SRP9P49458 RN7SL441P-201ENST00000492388 296 ntBASIC4.32□□□□□ -1.72
SRP9P49458 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.32□□□□□ -1.72
SRP9P49458 AC008638.1-201ENST00000506035 866 ntBASIC4.32□□□□□ -1.72
SRP9P49458 AC021146.3-201ENST00000511911 260 ntBASIC4.32□□□□□ -1.72
SRP9P49458 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.32□□□□□ -1.72
SRP9P49458 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.32□□□□□ -1.72
SRP9P49458 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.32□□□□□ -1.72
SRP9P49458 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.32□□□□□ -1.72
SRP9P49458 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC4.32□□□□□ -1.72
SRP9P49458 MIR3691-201ENST00000578066 90 ntBASIC4.32□□□□□ -1.72
SRP9P49458 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SRP9P49458 AP002799.1-201ENST00000623552 423 ntBASIC4.32□□□□□ -1.72
SRP9P49458 AC067931.1-201ENST00000624190 671 ntBASIC4.32□□□□□ -1.72
SRP9P49458 AP002967.1-201ENST00000624203 539 ntBASIC4.32□□□□□ -1.72
SRP9P49458 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
SRP9P49458 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SRP9P49458 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms