Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.82□□□□□ -1.64
CXCL12P48061 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CXCL12P48061 AC015795.1-201ENST00000513669 327 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 SNORA70.11-201ENST00000515987 138 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 SNORA70.13-201ENST00000516116 138 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 SEPT10P1-201ENST00000517342 1162 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 AC130364.2-201ENST00000528639 604 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC4.82□□□□□ -1.64
CXCL12P48061 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL12P48061 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL12P48061 AC068831.4-201ENST00000556118 109 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.82□□□□□ -1.64
CXCL12P48061 MIR5699-201ENST00000578903 90 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 BNIP3P22-201ENST00000593399 556 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.82□□□□□ -1.64
CXCL12P48061 AC010632.3-201ENST00000611377 369 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 AC024941.1-201ENST00000612250 334 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 AL392048.1-201ENST00000613946 534 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 AL022401.1-201ENST00000619498 108 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 AP005019.3-201ENST00000620418 560 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL12P48061 AC097063.1-201ENST00000426714 1797 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL12P48061 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CXCL12P48061 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
CXCL12P48061 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CXCL12P48061 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CXCL12P48061 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC4.82□□□□□ -1.64
CXCL12P48061 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL12P48061 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CXCL12P48061 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC4.82□□□□□ -1.64
CXCL12P48061 AC004656.1-201ENST00000568479 4951 ntBASIC4.82□□□□□ -1.64
CXCL12P48061 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CXCL12P48061 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CXCL12P48061 AC093671.1-201ENST00000624981 2929 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL12P48061 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL12P48061 AC112198.2-201ENST00000426589 6996 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL12P48061 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 SNORA70.6-201ENST00000383934 134 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 MIR23B-201ENST00000384832 97 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL12P48061 LINC00993-201ENST00000420453 540 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL12P48061 CBX1P1-201ENST00000440184 427 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 AC023271.1-201ENST00000445936 1090 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC4.81□□□□□ -1.64
CXCL12P48061 AC091868.1-201ENST00000508746 304 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 AC007016.1-201ENST00000512110 244 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 MTCO1P35-201ENST00000515270 228 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 AP001781.1-201ENST00000530977 207 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.81□□□□□ -1.64
CXCL12P48061 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL12P48061 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL12P48061 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
CXCL12P48061 AC073091.2-201ENST00000603205 907 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC4.81□□□□□ -1.64
CXCL12P48061 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.81□□□□□ -1.64
CXCL12P48061 AL161637.1-201ENST00000622380 412 ntBASIC4.81□□□□□ -1.64
CXCL12P48061 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.81□□□□□ -1.64
CXCL12P48061 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC4.81□□□□□ -1.64
CXCL12P48061 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CXCL12P48061 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC4.81□□□□□ -1.64
CXCL12P48061 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
CXCL12P48061 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CXCL12P48061 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CXCL12P48061 RAD17P1-201ENST00000418130 2042 ntBASIC4.8□□□□□ -1.64
CXCL12P48061 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CXCL12P48061 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.8□□□□□ -1.64
CXCL12P48061 MAPK10-328ENST00000641553 4009 ntBASIC4.8□□□□□ -1.64
CXCL12P48061 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CXCL12P48061 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.8□□□□□ -1.64
CXCL12P48061 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.8□□□□□ -1.64
CXCL12P48061 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
CXCL12P48061 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CXCL12P48061 XKRY2-202ENST00000623874 1581 ntBASIC4.8□□□□□ -1.64
CXCL12P48061 XKRY-202ENST00000624960 1581 ntBASIC4.8□□□□□ -1.64
CXCL12P48061 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.8□□□□□ -1.64
CXCL12P48061 AL591848.1-201ENST00000413092 322 ntBASIC4.8□□□□□ -1.64
CXCL12P48061 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.8□□□□□ -1.64
CXCL12P48061 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CXCL12P48061 AC140479.3-201ENST00000418944 1126 ntBASIC4.8□□□□□ -1.64
CXCL12P48061 AL358176.3-201ENST00000420757 454 ntBASIC4.8□□□□□ -1.64
CXCL12P48061 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC4.8□□□□□ -1.64
CXCL12P48061 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
CXCL12P48061 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.8□□□□□ -1.64
CXCL12P48061 RPL7P32-201ENST00000457119 744 ntBASIC4.8□□□□□ -1.64
CXCL12P48061 CYCSP34-201ENST00000458172 304 ntBASIC4.8□□□□□ -1.64
CXCL12P48061 RPL23AP24-201ENST00000458203 385 ntBASIC4.8□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms