Protein–RNA interactions for Protein: P47902

CDX1, Homeobox protein CDX-1, humanhuman

Predicted RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1P47902 AC010200.2-201ENST00000605098 235 ntBASIC4.48□□□□□ -1.69
CDX1P47902 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 RNA5SP440-201ENST00000612665 119 ntBASIC4.48□□□□□ -1.69
CDX1P47902 MIR6862-1-201ENST00000613016 70 ntBASIC4.48□□□□□ -1.69
CDX1P47902 MIR6862-2-201ENST00000614755 70 ntBASIC4.48□□□□□ -1.69
CDX1P47902 CCL14-204ENST00000622526 472 ntTSL 3 BASIC4.48□□□□□ -1.69
CDX1P47902 AL691477.1-201ENST00000624398 162 ntBASIC4.48□□□□□ -1.69
CDX1P47902 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
CDX1P47902 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 AC112198.2-201ENST00000426589 6996 ntBASIC4.48□□□□□ -1.69
CDX1P47902 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDX1P47902 AC010329.2-201ENST00000595195 2737 ntBASIC4.48□□□□□ -1.69
CDX1P47902 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
CDX1P47902 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC4.48□□□□□ -1.69
CDX1P47902 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
CDX1P47902 Z95327.2-201ENST00000414579 1873 ntBASIC4.47□□□□□ -1.69
CDX1P47902 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 AC120338.1-201ENST00000625074 1541 ntBASIC4.47□□□□□ -1.69
CDX1P47902 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 AL672167.1-204ENST00000641875 3017 ntBASIC4.47□□□□□ -1.69
CDX1P47902 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 AC092681.1-201ENST00000297369 291 ntBASIC4.47□□□□□ -1.69
CDX1P47902 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 AC017079.1-201ENST00000333650 415 ntBASIC4.47□□□□□ -1.69
CDX1P47902 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDX1P47902 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDX1P47902 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDX1P47902 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDX1P47902 RPS26P47-201ENST00000427219 348 ntBASIC4.47□□□□□ -1.69
CDX1P47902 ETF1P3-201ENST00000430422 1160 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AL512637.2-201ENST00000431287 1256 ntBASIC4.47□□□□□ -1.69
CDX1P47902 PPIAP13-201ENST00000434706 478 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 C21orf91-OT1-203ENST00000439392 497 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 OR2AF1P-201ENST00000454899 889 ntBASIC4.47□□□□□ -1.69
CDX1P47902 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 AC015908.1-201ENST00000478739 476 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 AC104629.1-201ENST00000494226 508 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AL136038.1-201ENST00000497246 351 ntBASIC4.47□□□□□ -1.69
CDX1P47902 PPM1AP1-201ENST00000502740 1135 ntBASIC4.47□□□□□ -1.69
CDX1P47902 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 HMGN1P15-201ENST00000513870 295 ntBASIC4.47□□□□□ -1.69
CDX1P47902 SNORA43.3-201ENST00000517240 103 ntBASIC4.47□□□□□ -1.69
CDX1P47902 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 C1DP5-201ENST00000525775 383 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.47□□□□□ -1.69
CDX1P47902 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 AC106734.1-201ENST00000568646 663 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 MIR4505-201ENST00000582238 73 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 NANOGP3-201ENST00000605855 286 ntBASIC4.47□□□□□ -1.69
CDX1P47902 MIR6768-201ENST00000610734 72 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AC090607.5-201ENST00000615692 224 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 U6.48-201ENST00000618523 106 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AC253576.2-201ENST00000618815 580 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 AP000943.4-201ENST00000622912 357 ntBASIC4.47□□□□□ -1.69
CDX1P47902 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.47□□□□□ -1.69
CDX1P47902 AC015871.5-202ENST00000623252 701 ntBASIC4.47□□□□□ -1.69
CDX1P47902 AC007683.2-201ENST00000624681 714 ntBASIC4.47□□□□□ -1.69
CDX1P47902 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.47□□□□□ -1.69
CDX1P47902 AL138960.2-201ENST00000625145 535 ntBASIC4.47□□□□□ -1.69
CDX1P47902 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.47□□□□□ -1.69
CDX1P47902 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
CDX1P47902 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
CDX1P47902 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms