Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRT9P35527 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT9P35527 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT9P35527 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT9P35527 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT9P35527 RNU6-252P-201ENST00000363232 107 ntBASIC5.68□□□□□ -1.5
KRT9P35527 RNU6-792P-201ENST00000363490 107 ntBASIC5.68□□□□□ -1.5
KRT9P35527 RNA5SP335-201ENST00000363817 110 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AC005522.1-201ENST00000395416 346 ntBASIC5.68□□□□□ -1.5
KRT9P35527 HMGB1P10-201ENST00000395823 563 ntBASIC5.68□□□□□ -1.5
KRT9P35527 RNA5SP487-201ENST00000410186 122 ntBASIC5.68□□□□□ -1.5
KRT9P35527 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRT9P35527 TATDN1P1-201ENST00000414123 891 ntBASIC5.68□□□□□ -1.5
KRT9P35527 XKRYP4-201ENST00000414395 483 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AL513325.1-201ENST00000417716 1034 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.68□□□□□ -1.5
KRT9P35527 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.68□□□□□ -1.5
KRT9P35527 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT9P35527 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT9P35527 XKRYP5-201ENST00000449659 483 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AC243772.1-201ENST00000451620 410 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AC104634.1-201ENST00000452720 462 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT9P35527 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.68□□□□□ -1.5
KRT9P35527 RN7SL205P-201ENST00000490174 284 ntBASIC5.68□□□□□ -1.5
KRT9P35527 RN7SL547P-201ENST00000490793 290 ntBASIC5.68□□□□□ -1.5
KRT9P35527 RN7SL447P-201ENST00000494711 245 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AC104109.1-201ENST00000498563 436 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.68□□□□□ -1.5
KRT9P35527 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT9P35527 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT9P35527 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.68□□□□□ -1.5
KRT9P35527 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT9P35527 AC006427.1-201ENST00000514359 712 ntBASIC5.68□□□□□ -1.5
KRT9P35527 RN7SKP141-201ENST00000516167 338 ntBASIC5.68□□□□□ -1.5
KRT9P35527 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT9P35527 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT9P35527 OR8A2P-201ENST00000528631 952 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.68□□□□□ -1.5
KRT9P35527 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.68□□□□□ -1.5
KRT9P35527 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
KRT9P35527 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.68□□□□□ -1.5
KRT9P35527 SUGT1P3-202ENST00000604259 383 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AC092574.1-201ENST00000609771 420 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AC108359.1-201ENST00000616451 1211 ntBASIC5.68□□□□□ -1.5
KRT9P35527 BX005214.3-202ENST00000619809 325 ntBASIC5.68□□□□□ -1.5
KRT9P35527 AC097460.3-201ENST00000623099 442 ntBASIC5.68□□□□□ -1.5
KRT9P35527 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
KRT9P35527 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT9P35527 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT9P35527 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.68□□□□□ -1.5
KRT9P35527 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
KRT9P35527 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.68□□□□□ -1.5
KRT9P35527 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
KRT9P35527 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRT9P35527 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
KRT9P35527 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT9P35527 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT9P35527 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC5.67□□□□□ -1.5
KRT9P35527 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
KRT9P35527 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT9P35527 RNA5SP242-201ENST00000364171 118 ntBASIC5.67□□□□□ -1.5
KRT9P35527 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT9P35527 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT9P35527 RNU1-77P-201ENST00000390868 162 ntBASIC5.67□□□□□ -1.5
KRT9P35527 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
KRT9P35527 AC007738.1-201ENST00000413892 348 ntBASIC5.67□□□□□ -1.5
KRT9P35527 AL133325.1-201ENST00000421090 382 ntBASIC5.67□□□□□ -1.5
KRT9P35527 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.67□□□□□ -1.5
KRT9P35527 AP000949.1-201ENST00000438328 629 ntBASIC5.67□□□□□ -1.5
KRT9P35527 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.67□□□□□ -1.5
KRT9P35527 RPL34P26-201ENST00000445636 354 ntBASIC5.67□□□□□ -1.5
KRT9P35527 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.67□□□□□ -1.5
KRT9P35527 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 AL049829.1-201ENST00000465411 156 ntBASIC5.67□□□□□ -1.5
KRT9P35527 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 SNORA31.13-201ENST00000516624 135 ntBASIC5.67□□□□□ -1.5
KRT9P35527 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.67□□□□□ -1.5
KRT9P35527 MTND1P36-201ENST00000522384 936 ntBASIC5.67□□□□□ -1.5
KRT9P35527 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.67□□□□□ -1.5
KRT9P35527 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 NPM1P47-201ENST00000560843 856 ntBASIC5.67□□□□□ -1.5
KRT9P35527 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRT9P35527 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
KRT9P35527 RBM22P1-201ENST00000578589 1214 ntBASIC5.67□□□□□ -1.5
KRT9P35527 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.67□□□□□ -1.5
KRT9P35527 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 AC008814.1-201ENST00000603797 406 ntBASIC5.67□□□□□ -1.5
KRT9P35527 BNIP3P41-202ENST00000616656 861 ntBASIC5.67□□□□□ -1.5
KRT9P35527 AC005840.5-201ENST00000619166 599 ntBASIC5.67□□□□□ -1.5
KRT9P35527 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.67□□□□□ -1.5
KRT9P35527 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
KRT9P35527 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms