Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC13P31276 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC13P31276 IRF5P1-201ENST00000504852 2164 ntBASIC5.47□□□□□ -1.53
HOXC13P31276 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
HOXC13P31276 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.47□□□□□ -1.53
HOXC13P31276 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC13P31276 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
HOXC13P31276 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC13P31276 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HOXC13P31276 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.47□□□□□ -1.53
HOXC13P31276 OR51C1P-202ENST00000641159 1444 ntBASIC5.47□□□□□ -1.53
HOXC13P31276 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC13P31276 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
HOXC13P31276 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
HOXC13P31276 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC5.46□□□□□ -1.53
HOXC13P31276 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC13P31276 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
HOXC13P31276 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.53
HOXC13P31276 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXC13P31276 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXC13P31276 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
HOXC13P31276 RNA5SP241-201ENST00000391326 114 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AMZ2P2-201ENST00000406819 1057 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 RN7SKP222-201ENST00000410651 315 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 RNA5SP498-201ENST00000411342 120 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AC016397.1-201ENST00000412463 242 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC13P31276 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC13P31276 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC13P31276 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC13P31276 APOOP2-201ENST00000461561 539 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AP000942.1-201ENST00000463969 747 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AL672167.3-201ENST00000465951 960 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 RPL7P40-201ENST00000481703 745 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 RN7SL814P-201ENST00000487715 300 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC13P31276 RNU6-491P-201ENST00000516099 110 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 PDCD5P1-201ENST00000543528 309 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AC074029.2-201ENST00000551045 634 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 SETP1-201ENST00000556014 845 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC13P31276 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.46□□□□□ -1.54
HOXC13P31276 PDCD6IPP2-207ENST00000566321 1069 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.46□□□□□ -1.54
HOXC13P31276 RN7SL290P-201ENST00000578661 300 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AC095055.1-201ENST00000603472 1113 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AL162431.4-201ENST00000604674 411 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 MIR6839-201ENST00000620425 113 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 RPL23AP61-201ENST00000623642 466 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 AP003497.2-201ENST00000624220 967 ntBASIC5.46□□□□□ -1.54
HOXC13P31276 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
HOXC13P31276 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.46□□□□□ -1.54
HOXC13P31276 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
HOXC13P31276 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC13P31276 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC13P31276 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
HOXC13P31276 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
HOXC13P31276 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
HOXC13P31276 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC13P31276 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
HOXC13P31276 RN7SKP153-201ENST00000365026 316 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 RNU6-146P-201ENST00000384602 108 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 AL589655.1-201ENST00000405398 482 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC13P31276 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC13P31276 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC13P31276 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC13P31276 GAPDHP14-201ENST00000450472 937 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC13P31276 MTND3P4-201ENST00000453537 303 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC13P31276 RPL7AP52-201ENST00000458096 790 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 RNU6-1218P-201ENST00000458990 108 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 RN7SL738P-201ENST00000470264 297 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 RPS29P22-201ENST00000472363 168 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 MTND6P6-201ENST00000478031 263 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.45□□□□□ -1.54
HOXC13P31276 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.45□□□□□ -1.54
HOXC13P31276 AC108471.1-201ENST00000513977 287 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 ACTR6P1-201ENST00000514311 1104 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 AC034244.2-201ENST00000514668 858 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 AC067904.2-201ENST00000517322 1283 ntBASIC5.45□□□□□ -1.54
HOXC13P31276 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.45□□□□□ -1.54
HOXC13P31276 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.45□□□□□ -1.54
HOXC13P31276 AC090312.1-201ENST00000580637 348 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms