Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 EIF2AP4-201ENST00000424793 1781 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A5P29400 AL121950.1-201ENST00000624993 2077 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.53□□□□□ -1.52
COL4A5P29400 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A5P29400 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A5P29400 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A5P29400 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
COL4A5P29400 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A5P29400 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A5P29400 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A5P29400 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A5P29400 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
COL4A5P29400 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A5P29400 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.53□□□□□ -1.52
COL4A5P29400 CYCSP19-201ENST00000411715 316 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.53□□□□□ -1.52
COL4A5P29400 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A5P29400 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A5P29400 NDUFB4P12-201ENST00000513465 390 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 RNU1-45P-201ENST00000517191 141 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 OR8A2P-201ENST00000528631 952 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC5.53□□□□□ -1.52
COL4A5P29400 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.53□□□□□ -1.52
COL4A5P29400 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A5P29400 MIR6891-201ENST00000618788 93 ntBASIC5.53□□□□□ -1.52
COL4A5P29400 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
COL4A5P29400 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
COL4A5P29400 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
COL4A5P29400 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A5P29400 AC017104.4-201ENST00000636283 1592 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
COL4A5P29400 LARP1BP1-201ENST00000506036 1359 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 CR1-203ENST00000367051 7469 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A5P29400 ATP5F1P3-201ENST00000397213 657 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 AC021876.1-201ENST00000425959 359 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 RPL23AP52-201ENST00000439311 478 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A5P29400 OR52E3P-201ENST00000452083 936 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 AC053481.1-201ENST00000467217 306 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A5P29400 MTCO1P49-201ENST00000523429 802 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A5P29400 RN7SL600P-201ENST00000581811 299 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 IPO5P1-202ENST00000600039 287 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.52□□□□□ -1.53
COL4A5P29400 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.52□□□□□ -1.53
COL4A5P29400 MIR6867-201ENST00000610636 67 ntBASIC5.52□□□□□ -1.53
COL4A5P29400 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A5P29400 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A5P29400 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A5P29400 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
COL4A5P29400 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC5.52□□□□□ -1.53
COL4A5P29400 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A5P29400 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A5P29400 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A5P29400 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A5P29400 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL4A5P29400 SNORA11.2-201ENST00000408318 127 ntBASIC5.51□□□□□ -1.53
COL4A5P29400 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
COL4A5P29400 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.51□□□□□ -1.53
COL4A5P29400 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A5P29400 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A5P29400 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A5P29400 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A5P29400 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.51□□□□□ -1.53
COL4A5P29400 AC090506.2-201ENST00000624521 419 ntBASIC5.51□□□□□ -1.53
COL4A5P29400 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.51□□□□□ -1.53
COL4A5P29400 AL139254.3-201ENST00000641097 674 ntBASIC5.51□□□□□ -1.53
COL4A5P29400 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A5P29400 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.51□□□□□ -1.53
COL4A5P29400 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.51□□□□□ -1.53
COL4A5P29400 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
COL4A5P29400 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.51□□□□□ -1.53
COL4A5P29400 OR5P1P-201ENST00000299512 925 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 U3.35-201ENST00000408405 208 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 COX6CP15-201ENST00000426313 211 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC5.5□□□□□ -1.53
COL4A5P29400 RPL23AP43-201ENST00000446445 471 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.5□□□□□ -1.53
COL4A5P29400 AC108064.1-201ENST00000513791 460 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC5.5□□□□□ -1.53
COL4A5P29400 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.5□□□□□ -1.53
COL4A5P29400 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.5□□□□□ -1.53
COL4A5P29400 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.5□□□□□ -1.53
COL4A5P29400 AC091979.2-201ENST00000607514 214 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 Z95327.3-201ENST00000610385 572 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 KCNMA1-203ENST00000354353 5732 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
COL4A5P29400 AC108467.2-201ENST00000617640 1597 ntBASIC5.5□□□□□ -1.53
COL4A5P29400 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
COL4A5P29400 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
COL4A5P29400 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
COL4A5P29400 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms